BALL  1.5.0
Class Hierarchy
This inheritance list is sorted roughly, but not completely, alphabetically:
[detail level 1234567891011]
 CBALL::Addition< First, Second, DataType >
 CBALL::AmberFF::Default
 CBALL::AmberFF::Option
 CBALL::AmberTorsion::SingleAmberTorsion
 CBALL::AromaticityProcessor::DefaultDefault values for options
 CBALL::AromaticityProcessor::OptionOption names
 CBALL::AromaticRingStacking::Default
 CBALL::AromaticRingStacking::Option
 CBALL::AssignBondOrderProcessor::Algorithm
 CBALL::AssignBondOrderProcessor::DefaultDefault values for options
 CBALL::AssignBondOrderProcessor::OptionOption names
 CBALL::AStarBondOrderStrategy::Default
 CBALL::AStarBondOrderStrategy::Heuristic
 CBALL::AStarBondOrderStrategy::OptionOption names
 CBALL::Atom::BondIteratorTraits
 CBALL::AtomTyper
 CBALL::AutoDeletable
 CBALL::BALLPlugin
 CBALL::BaseIterator< Container, DataType, Position, Traits >
 CBALL::BinaryFileAdaptor< T >
 CBALL::BinaryFingerprintMethodsThis class provides efficient similarity calculation functionality for 2D binary fingerprints
 CBALL::BinaryFingerprintMethods::Default
 CBALL::BinaryFingerprintMethods::Option
 CBALL::BinaryFunctor< FirstArgumentType, SecondArgumentType, ResultType >
 CBALL::BindingPocketProcessor::Default
 CBALL::BindingPocketProcessor::Option
 CBALL::Bit
 CBALL::BitVector
 CBALL::BondOrderAssignmentStrategyBase class for bond order assignment algorithms
 CBALL::BranchAndBoundBondOrderStrategy::Default
 CBALL::BranchAndBoundBondOrderStrategy::OptionOption names
 CBALL::BuildBondsProcessor::DefaultDefault values for options
 CBALL::BuildBondsProcessor::OptionOption names
 CBALL::BuriedPolar::Default
 CBALL::BuriedPolar::Option
 CBALL::CanonicalMD::AuxFactorsHelper class containing auxiliary factors
 CBALL::CharmmEEF1::Data
 CBALL::CharmmEEF1::Values
 CBALL::CharmmFF::Default
 CBALL::CharmmFF::Option
 CBALL::CharmmTorsion::SingleCharmmTorsion
 CBALL::CHPI::AromaticRing
 CBALL::CHPI::CHGroup
 CBALL::CHPI::Default
 CBALL::CHPI::Option
 CBALL::CHPISlick::AromaticRing
 CBALL::CHPISlick::CHGroup
 CBALL::CHPISlick::Default
 CBALL::CHPISlick::Option
 CBALL::CIFFile::Datablock
 CBALL::CIFFile::Datacontent
 CBALL::CIFFile::Item
 CBALL::CIFFile::SaveFrame
 CBALL::CIFFile::State
 CBALL::Client
 CBALL::CommandlineParser
 CBALL::Comparator< T >
 CBALL::Composite::AncestorIteratorTraits
 CBALL::Composite::ChildCompositeIteratorTraits
 CBALL::Composite::CompositeIteratorTraits
 CBALL::CompositeIteratorTraits
 CBALL::Conformation
 CBALL::ConformationSet
 CBALL::ConjugateGradientMinimizer::Default
 CBALL::ConjugateGradientMinimizer::Option
 CBALL::ConnectedToPredicate::CTPNode
 CBALL::Constant
 CBALL::ConstantFunction< constant_template >
 CBALL::Constraint
 CBALL::CosineTorsion::Data
 CBALL::CosineTorsion::SingleData
 CBALL::CosineTorsion::SingleValues
 CBALL::CosineTorsion::Values
 CBALL::CrystalGenerator
 CBALL::CrystalGenerator::Default
 CBALL::CrystalGenerator::Option
 CBALL::CrystalInfo::Default
 CBALL::CrystalInfo::Option
 CBALL::CubicFunction< Function, DataType >
 CBALL::CubicSpline1D
 CBALL::CubicSpline2D
 CBALL::Directory
 CBALL::Division< First, Second, DataType >
 CBALL::DockingAlgorithm
 CBALL::DockProblem
 CBALL::DockResult
 CBALL::DockResult::Compare_
 CBALL::DockResult::Scoring_
 CBALL::DoubleTraits
 CBALL::EdgeItem< Node, Edge >
 CBALL::ElectrostaticPotentialCalculator
 CBALL::ElectrostaticPotentialCalculator::Default
 CBALL::ElectrostaticPotentialCalculator::Option
 CBALL::Element
 CBALL::Embeddable
 CBALL::EmpiricalHSShiftProcessor::DefaultDefault values for options
 CBALL::EmpiricalHSShiftProcessor::OptionOption names
 CBALL::EmpiricalHSShiftProcessor::PropertiesForShift_
 CBALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
 CBALL::EnergeticEvaluation
 CBALL::EnergyMinimizer
 CBALL::EnergyMinimizer::Default
 CBALL::EnergyMinimizer::Option
 CBALL::Enumerator< Container, SiteIterator, Variant >
 CBALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_
 CBALL::EvolutionaryDocking::Default
 CBALL::EvolutionaryDocking::Option
 CBALL::Exception::GlobalExceptionHandler
 CBALL::Expression
 CBALL::ExpressionParser
 CBALL::ExpressionParser::State
 CBALL::ExpressionParser::SyntaxTree
 CBALL::ExpressionTree
 CBALL::Factory< T >
 CBALL::FDPB
 CBALL::FDPB::Boundary
 CBALL::FDPB::ChargeDistribution
 CBALL::FDPB::Default
 CBALL::FDPB::DielectricSmoothing
 CBALL::FDPB::FastAtomStruct
 CBALL::FDPB::Option
 CBALL::FileSystem
 CBALL::FlexDefinition
 CBALL::FlexibleMolecule
 CBALL::FloatTraits
 CBALL::ForceField
 CBALL::FPTBondOrderStrategy::AdditionalBagProperties_
 CBALL::FPTBondOrderStrategy::Assignment_
 CBALL::FPTBondOrderStrategy::BackTrackingState_
 CBALL::FPTBondOrderStrategy::ComputingData_
 CBALL::FPTBondOrderStrategy::DefaultDefault option values
 CBALL::FPTBondOrderStrategy::DPBackTracking_
 CBALL::FPTBondOrderStrategy::DPBackTracking_::StateComparator_
 CBALL::FPTBondOrderStrategy::DPBackTrackingCombiner_
 CBALL::FPTBondOrderStrategy::DPConfig_
 CBALL::FPTBondOrderStrategy::DPJoinMapComparator_
 CBALL::FPTBondOrderStrategy::DPTable_
 CBALL::FPTBondOrderStrategy::EdgeComparator_
 CBALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
 CBALL::FPTBondOrderStrategy::OptionOption names
 CBALL::FragmentDB
 CBALL::FragmentDB::BuildBondsProcessor::Connection
 CBALL::FresnoTypes
 CBALL::GAFFCESParser
 CBALL::GAFFCESParser::APSMatcher
 CBALL::GAFFCESParser::APSMatcher::APSTerm
 CBALL::GAFFCESParser::CESPredicate
 CBALL::GAFFCESParser::State
 CBALL::GAFFTypeProcessor::Default
 CBALL::GAFFTypeProcessor::Option
 CBALL::GAFFTypeProcessor::TypeDefinitionNested class definitions
 CBALL::GAMESSDatFile::block
 CBALL::GAMESSDatFile::State
 CBALL::GAMESSLogFile::State
 CBALL::GeneralizedBornModel
 CBALL::GeneralizedBornModel::Default
 CBALL::GeneralizedBornModel::Option
 CBALL::GenericGene
 CBALL::GenericParameter
 CBALL::GeneticAlgorithm
 CBALL::GeneticIndividual
 CBALL::GeometricFit::Default
 CBALL::GeometricFit::Option
 CBALL::GeometricFit::Peak_
 CBALL::GeometricFit::RotationAngles_
 CBALL::GlobalInitializer
 CBALL::GRAPH::EditableEdgeCopier< Graph1, Graph2 >
 CBALL::GRAPH::EditableVertexCopier< Graph1, Graph2 >
 CBALL::GRAPH::GraphTraits< Graph >
 CBALL::GRAPH::PostOrderFolding< Tree, From, To, Functor >
 CBALL::GRAPH::UndoEliminateOperation< UndirectedGraph >
 CBALL::GraphEdge< Vertex, Edge, Face >
 CBALL::GraphFace< Vertex, Edge, Face >
 CBALL::GraphTriangle< Vertex, Edge, Face >
 CBALL::GraphVertex< Vertex, Edge, Face >
 CBALL::GridAnalysis
 CBALL::GridBasedScoring::Default
 CBALL::GridBasedScoring::GridSetsResult
 CBALL::GridBasedScoring::Option
 CBALL::HashGrid3< Item >Three-dimensional Hash Grid Class
 CBALL::HashGrid3< Item >::BoxIteratorTraits
 CBALL::HashGridBox3< Item >
 CBALL::HashGridBox3< Item >::BoxIteratorTraits
 CBALL::HashGridBox3< Item >::DataIteratorTraits
 CBALL::HashSet< Key >
 CBALL::HashSet< Key >::IteratorTraits
 CBALL::HashSet< Key >::Node
 CBALL::HBondProcessor::DefaultDefault values for options
 CBALL::HBondProcessor::HBond
 CBALL::HBondProcessor::OptionOption names
 CBALL::HBondProcessor::PredictionMethodDefault values for options
 CBALL::HBondProcessor::ResidueData
 CBALL::HMOFile::HMOCharge
 CBALL::HybridisationProcessor::AtomNames_
 CBALL::HybridisationProcessor::DefaultDefault values for options
 CBALL::HybridisationProcessor::Elements_
 CBALL::HybridisationProcessor::Method
 CBALL::HybridisationProcessor::OptionOption names
 CBALL::HydrogenBond::Default
 CBALL::HydrogenBond::Option
 CBALL::HydrogenBondSlick::Default
 CBALL::HydrogenBondSlick::Option
 CBALL::IMGDock::Default
 CBALL::IMGDock::Option
 CBALL::INIFile
 CBALL::INIFile::IteratorTraits_Interface for the LineIterator
 CBALL::INIFile::Section
 CBALL::JCAMPFile::JCAMPValue
 CBALL::JohnsonBoveyShiftProcessor::Ring
 CBALL::Kekuliser
 CBALL::KGreedyBondOrderStrategy::Default
 CBALL::KGreedyBondOrderStrategy::OptionOption names
 CBALL::LennardJones::Data
 CBALL::LennardJones::Values
 CBALL::LineSearch
 CBALL::Lipophilic::Default
 CBALL::Lipophilic::Option
 CBALL::LogP
 CBALL::LogStreamBuf::LoglineStruct
 CBALL::LogStreamBuf::StreamStruct
 CBALL::LogStreamNotifier
 CBALL::LongDoubleTraits
 CBALL::MicroCanonicalMD::AuxFactors
 CBALL::MMFF94::Default
 CBALL::MMFF94::Option
 CBALL::MMFF94AtomTypeClass to store the values of an atom type from MMFFPROP.PAR
 CBALL::MMFF94AtomTyper::AromaticType
 CBALL::MMFF94NonBonded::NonBondedPairData
 CBALL::MMFF94OutOfPlaneBend::OutOfPlaneBend
 CBALL::MMFF94ParametersBase
 CBALL::MMFF94StretchBend::BendSee MMFFANG.PAR
 CBALL::MMFF94StretchBend::Stretch
 CBALL::MMFF94StretchBend::StretchBend
 CBALL::MMFF94StretchParameters::BondData
 CBALL::MMFF94StretchParameters::EmpiricalBondData
 CBALL::MMFF94Torsion::TorsionSee MMFFTOR.PAR
 CBALL::MMFF94VDWParameters::VDWEntry
 CBALL::MOL2File::AtomStruct
 CBALL::MOL2File::BondStruct
 CBALL::MOL2File::CommentStruct
 CBALL::MOL2File::MoleculeStruct
 CBALL::MOL2File::SetStructA class used for storing TRIPOS sets
 CBALL::MOL2File::SubstructureStruct
 CBALL::MolecularDynamics
 CBALL::MolecularDynamics::Default
 CBALL::MolecularDynamics::Option
 CBALL::MolecularInteractions
 CBALL::MolecularSimilarity
 CBALL::MOLFile::AtomStruct
 CBALL::MOLFile::BondStruct
 CBALL::MOLFile::CountsStruct
 CBALL::MOLFile::Property
 CBALL::MolFileFactory
 CBALL::MPISupport
 CBALL::MutableConstant< DataType >
 CBALL::MutablePower< Function, DataType >
 CBALL::Mutator
 CBALL::NMRStarFile::BALLToBMRBMapper
 CBALL::NMRStarFile::EntryInformation
 CBALL::NMRStarFile::MolecularSystem
 CBALL::NMRStarFile::MolecularSystem::ChemicalUnit
 CBALL::NMRStarFile::MolecularSystem::RelatedDB
 CBALL::NMRStarFile::MonomericPolymer
 CBALL::NMRStarFile::MonomericPolymer::HomologDBDatabase with homolog entries
 CBALL::NMRStarFile::NMRAtomData
 CBALL::NMRStarFile::NMRAtomDataSet
 CBALL::NMRStarFile::NMRSpectrometer
 CBALL::NMRStarFile::Sample
 CBALL::NMRStarFile::Sample::Component
 CBALL::NMRStarFile::SampleCondition
 CBALL::NMRStarFile::ShiftReferenceElement
 CBALL::NMRStarFile::ShiftReferenceSet
 CBALL::NodeItem< Node, Edge >
 CBALL::NonpolarSolvation::Default
 CBALL::NonpolarSolvation::Option
 CBALL::NucleotideMapping
 CBALL::NumericalIntegrator< Function, DataType >
 CBALL::NumericalSAS
 CBALL::NumericalSAS::Default
 CBALL::NumericalSAS::Option
 CBALL::ObjectCreator
 CBALL::Pair6_12InteractionEnergyProcessor::Default
 CBALL::Pair6_12InteractionEnergyProcessor::Option
 CBALL::Pair6_12RDFIntegrator::Default
 CBALL::Pair6_12RDFIntegrator::Option
 CBALL::PairExpInteractionEnergyProcessor::Default
 CBALL::PairExpInteractionEnergyProcessor::Option
 CBALL::PairExpRDFIntegrator::Default
 CBALL::PairExpRDFIntegrator::Option
 CBALL::Parameters
 CBALL::ParameterSection
 CBALL::ParamFile::ParameterDescription
 CBALL::PartialBondOrderAssignmentA full or partial solution to the AStar-based bond order assignment problem
 CBALL::Path
 CBALL::PCMCavFreeEnergyProcessor::Default
 CBALL::PCMCavFreeEnergyProcessor::Option
 CBALL::PDB::AdditionalAtomInfo
 CBALL::PDB::BookKeeping
 CBALL::PDB::RecordANISOU
 CBALL::PDB::RecordATOM
 CBALL::PDB::RecordAUTHOR
 CBALL::PDB::RecordCAVEAT
 CBALL::PDB::RecordCISPEP
 CBALL::PDB::RecordCOMPND
 CBALL::PDB::RecordCON06
 CBALL::PDB::RecordCON061
 CBALL::PDB::RecordCON062
 CBALL::PDB::RecordCON063
 CBALL::PDB::RecordCON064
 CBALL::PDB::RecordCONECT
 CBALL::PDB::RecordCRYST1
 CBALL::PDB::RecordCRYST1::UnitCell
 CBALL::PDB::RecordDBREF
 CBALL::PDB::RecordDBREF::EndingDatabaseSegment
 CBALL::PDB::RecordDBREF::EndingSequence
 CBALL::PDB::RecordDBREF::InitialDatabaseSegment
 CBALL::PDB::RecordDBREF::InitialSequence
 CBALL::PDB::RecordEND
 CBALL::PDB::RecordENDMDL
 CBALL::PDB::RecordEXPDTA
 CBALL::PDB::RecordFORMUL
 CBALL::PDB::RecordFTNOTE
 CBALL::PDB::RecordHEADER
 CBALL::PDB::RecordHELIX
 CBALL::PDB::RecordHET
 CBALL::PDB::RecordHETATM
 CBALL::PDB::RecordHETNAM
 CBALL::PDB::RecordHETSYN
 CBALL::PDB::RecordHYDBND
 CBALL::PDB::RecordHYDBND::HydrogenAtom
 CBALL::PDB::RecordHYDBND::HydrogenPartnerAtom
 CBALL::PDB::RecordJRNL
 CBALL::PDB::RecordKEYWDS
 CBALL::PDB::RecordLINK
 CBALL::PDB::RecordLINK::LinkPartner
 CBALL::PDB::RecordMASTER
 CBALL::PDB::RecordMODEL
 CBALL::PDB::RecordMODRES
 CBALL::PDB::RecordMTRIX1
 CBALL::PDB::RecordMTRIX2
 CBALL::PDB::RecordMTRIX3
 CBALL::PDB::RecordOBSLTE
 CBALL::PDB::RecordORIGX1
 CBALL::PDB::RecordORIGX2
 CBALL::PDB::RecordORIGX3
 CBALL::PDB::RecordREMARK
 CBALL::PDB::RecordREVDAT
 CBALL::PDB::RecordSCALE1
 CBALL::PDB::RecordSCALE2
 CBALL::PDB::RecordSCALE3
 CBALL::PDB::RecordSEQADV
 CBALL::PDB::RecordSEQRES
 CBALL::PDB::RecordSHEET
 CBALL::PDB::RecordSIGATM
 CBALL::PDB::RecordSIGUIJ
 CBALL::PDB::RecordSITE
 CBALL::PDB::RecordSLTBRG
 CBALL::PDB::RecordSLTBRG::PartnerAtom
 CBALL::PDB::RecordSOURCE
 CBALL::PDB::RecordSPRSDE
 CBALL::PDB::RecordSSBOND
 CBALL::PDB::RecordTER
 CBALL::PDB::RecordTITLE
 CBALL::PDB::RecordTURN
 CBALL::PDB::RecordTVECT
 CBALL::PDB::RecordTypeFormat
 CBALL::PDB::RecordUNKNOWN
 CBALL::PDB::Residue
 CBALL::PDB::Structure
 CBALL::PDB::Structure::AtomEntry
 CBALL::PDB::Structure::ConectAtomList
 CBALL::PDB::Structure::NCSMatrix
 CBALL::PDB::Structure::UnitCellInfo
 CBALL::PDBFile::Default
 CBALL::PDBFile::Option
 CBALL::Peptides::AminoAcidDescriptor
 CBALL::Peptides::NameConverter::DefaultDefault values for options
 CBALL::Peptides::NameConverter::OptionOption names
 CBALL::Peptides::PeptideBuilder
 CBALL::PeriodicBoundary
 CBALL::PeriodicBoundary::DefaultDefault values
 CBALL::PeriodicBoundary::Option
 CBALL::PersistenceManager
 CBALL::PiecewiseFunction
 CBALL::PierottiCavFreeEnergyProcessor::Default
 CBALL::PierottiCavFreeEnergyProcessor::Option
 CBALL::PLP::NonBondedPairData
 CBALL::PluginHandler
 CBALL::PluginManager
 CBALL::PolarSolvation::Default
 CBALL::PolarSolvation::Option
 CBALL::PoseClusteringComputation of clusters of docking poses
 CBALL::PoseClustering::ClusterProperties
 CBALL::PoseClustering::ClusterTreeNodeComparator
 CBALL::PoseClustering::ClusterTreeWriter_
 CBALL::PoseClustering::DefaultDefault values for options
 CBALL::PoseClustering::OptionOption names
 CBALL::PoseClustering::PosePointer
 CBALL::PoseClustering::RigidTransformation
 CBALL::Potential1210::Data
 CBALL::Potential1210::Values
 CBALL::PreciseTime
 CBALL::Processor
 CBALL::Product< First, Second, DataType >
 CBALL::PropertyManager
 CBALL::PTE_
 CBALL::PTE_::SymbolToElement
 CBALL::PubChemDownloaderDownloads PubChem entries
 CBALL::PyInterpreter
 CBALL::PyKernel
 CBALL::PyServer
 CBALL::QSAR::AutomaticModelCreator
 CBALL::QSAR::ConfigIO
 CBALL::QSAR::FeatureSelection
 CBALL::QSAR::FeatureSelectionConfiguration
 CBALL::QSAR::InputConfiguration
 CBALL::QSAR::InputPartitioningConfiguration
 CBALL::QSAR::Kernel
 CBALL::QSAR::LatentVariableModel
 CBALL::QSAR::Model
 CBALL::QSAR::ModelConfiguration
 CBALL::QSAR::ModelFactory< T >
 CBALL::QSAR::PredictionConfiguration
 CBALL::QSAR::QSARData
 CBALL::QSAR::Registry
 CBALL::QSAR::RegistryEntry
 CBALL::QSAR::Statistics
 CBALL::QSAR::Validation
 CBALL::QSAR::ValidationConfiguration
 CBALL::QuadraticAngleBend::Data
 CBALL::QuadraticAngleBend::Values
 CBALL::QuadraticBondStretch::Data
 CBALL::QuadraticBondStretch::Values
 CBALL::QuadraticImproperTorsion::Data
 CBALL::QuadraticImproperTorsion::Values
 CBALL::Quadruple< T1, T2, T3, T4 >
 CBALL::RadialDistributionFunction
 CBALL::RDFIntegrator
 CBALL::Reciprocal< Function, DataType >
 CBALL::ReducedSurface
 CBALL::RegularExpression
 CBALL::ReissCavFreeEnergyProcessor::Default
 CBALL::ReissCavFreeEnergyProcessor::Option
 CBALL::Rescorer
 CBALL::Rescoring
 CBALL::ResidueRotamerSet
 CBALL::ResidueTorsions::Data
 CBALL::ResourceEntry::IteratorTraits_
 CBALL::Result
 CBALL::Result::ResultData
 CBALL::RGroupAssembler
 CBALL::RingFinder
 CBALL::RingPerceptionProcessor::PathMessage_
 CBALL::RingPerceptionProcessor::TNode_
 CBALL::RMSDMinimizer
 CBALL::Rotamer
 CBALL::RotamerLibraryRotamer Library Class
 CBALL::RotateBond
 CBALL::RotateBonds
 CBALL::RSComputer
 CBALL::RSComputer::ProbePosition
 CBALL::RuleEvaluator
 CBALL::SASTriangulator
 CBALL::ScoreGridSet
 CBALL::ScoringBaseFunction
 CBALL::ScoringComponent
 CBALL::ScoringFunction
 CBALL::ScoringFunction::Default
 CBALL::ScoringFunction::Option
 CBALL::ScoringFunction::Result
 CBALL::ScoringOptimizer
 CBALL::ScoringOptimizer::Result
 CBALL::SDGenerator
 CBALL::SDGenerator::AtomComparator
 CBALL::SDGenerator::DefaultDefault values for options
 CBALL::SDGenerator::OptionOption names
 CBALL::Selectable
 CBALL::SESComputer
 CBALL::SESSingularityCleaner
 CBALL::SESSingularityCleaner::ProbeIntersection
 CBALL::SESTriangulator
 CBALL::ShiftedLVMMMinimizer::Default
 CBALL::ShiftedLVMMMinimizer::Option
 CBALL::SideChainOptimizer
 CBALL::SideChainPlacementProcessor::DefaultDefault values for options
 CBALL::SideChainPlacementProcessor::Method
 CBALL::SideChainPlacementProcessor::OptionOption names
 CBALL::SLICKEnergy::Default
 CBALL::SLICKEnergy::Option
 CBALL::SLICKScore::Default
 CBALL::SLICKScore::Option
 CBALL::SmartsMatcher
 CBALL::SmartsMatcher::RecStruct_Wrapper class which is used as an interface in the matching code to the pool
 CBALL::SmartsMatcher::RecStructCore_Core structure of the recursive matching algorithm for the object pool
 CBALL::SmartsMatcher::RecStructPool_Class which does the pool operations of the RecStructCore_ pool
 CBALL::SmartsParser
 CBALL::SmartsParser::SPAtomSmarts Parser Atom class
 CBALL::SmartsParser::SPAtom::PropertyProperty struct of smarts parser atom
 CBALL::SmartsParser::SPAtom::PropertyValuePossible types of the properties
 CBALL::SmartsParser::SPBondBond representation of the smarts parser
 CBALL::SmartsParser::SPEdgeEdge representation of the smarts parser graph
 CBALL::SmartsParser::SPNodeRepresentation of a node in the smarts parser graph
 CBALL::SmartsParser::StateParser state (used by the parser itself)
 CBALL::SmilesParser
 CBALL::SmilesParser::State
 CBALL::SnapShot
 CBALL::SnapShotManager
 CBALL::SnapShotManager::DefaultLocal class for handling default values for the options
 CBALL::SnapShotManager::OptionLocal class for handling options
 CBALL::SolventAccessibleSurface
 CBALL::SolventAtomDescriptor
 CBALL::SolventDescriptor
 CBALL::SolventExcludedSurface
 CBALL::SortedPosition2
 CBALL::SortedPosition3
 CBALL::Spectrum< DataT, PeakT, PositionT >
 CBALL::SquareFunction< Function, DataType >
 CBALL::StaticLigandFragment
 CBALL::StaticLigandFragment::Connection
 CBALL::StrangLBFGSMinimizer::Default
 CBALL::StrangLBFGSMinimizer::Option
 CBALL::String
 CBALL::StructurePreparer
 CBALL::Substring
 CBALL::Subtraction< First, Second, DataType >
 CBALL::TAngle< T >
 CBALL::TBox3< T >
 CBALL::TCircle3< T >
 CBALL::TContour< T >
 CBALL::TContourLine< T >
 CBALL::TContourSurface< T >::Cube
 CBALL::TCPServer
 CBALL::Timer
 CBALL::TimeStamp
 CBALL::TLine3< T >
 CBALL::TMatrix4x4< T >Default Type
 CBALL::TPlane3< T >
 CBALL::TrajectoryFileFactory
 CBALL::TransformationManager
 CBALL::TreeWidth< UndirectedGraph >
 CBALL::TreeWidth< UndirectedGraph >::BagContentWriter
 CBALL::TreeWidth< UndirectedGraph >::ComponentFilter_< ComponentMap >
 CBALL::TreeWidthImplementation< UndirectedGraph >
 CBALL::TreeWidthImplementation< UndirectedGraph >::FillInHeuristic
 CBALL::TreeWidthImplementation< UndirectedGraph >::MinorMinWidthCriterion
 CBALL::TreeWidthImplementation< UndirectedGraph >::MinorMinWidthReducer
 CBALL::TreeWidthImplementation< UndirectedGraph >::QuickBB< Lowerbound, Upperbound >
 CBALL::TreeWidthImplementation< UndirectedGraph >::QuickBB< Lowerbound, Upperbound >::QuickBBState
 CBALL::TreeWidthImplementation< UndirectedGraph >::TreeDecompositionBuilder< OriginalGraphType >
 CBALL::TRegularData1D< ValueType >
 CBALL::TRegularData1D< ValueType >::BlockValueTypeThe block data type for reading and writing binary data
 CBALL::TRegularData2D< ValueType >
 CBALL::TRegularData2D< ValueType >::BlockValueTypeThe block data type for reading and writing binary data
 CBALL::TRegularData2D< ValueType >::IndexTypeThe index type used to refer to a specific element in the grid (x-, and y-index)
 CBALL::TRegularData3D< ValueType >
 CBALL::TRegularData3D< ValueType >::BlockValueTypeThe block data type for reading and writing binary data
 CBALL::TRegularData3D< ValueType >::IndexTypeThe index type used to refer to a specific element in the grid (x-, y-, and z-index)
 CBALL::TriangulatedSphere::Face
 CBALL::TriangulatedSurface
 CBALL::Triple< T1, T2, T3 >
 CBALL::TRRFile::TRRHeader
 CBALL::TSimpleBox3< T >
 CBALL::TSimpleMolecularGraph< Node, Edge >
 CBALL::TSphere3< T >
 CBALL::TSurface< T >
 CBALL::TSurface< T >::Triangle
 CBALL::TVector2< T >
 CBALL::TVector3< T >
 CBALL::TVector4< T >
 CBALL::UCK
 CBALL::UhligCavFreeEnergyProcessor::Default
 CBALL::UhligCavFreeEnergyProcessor::Option
 CBALL::UnaryFunctor< ArgumentType, ResultType >
 CBALL::VanDerWaalsSlick::Default
 CBALL::VanDerWaalsSlick::Option
 CBALL::VersionInfo
 CBALL::VIEW::AddBackboneModel::ModelPart
 CBALL::VIEW::Camera
 CBALL::VIEW::ChannelFormat
 CBALL::VIEW::ClippingPlane
 CBALL::VIEW::ColorExtension2
 CBALL::VIEW::ColorHSV
 CBALL::VIEW::ColorRGBA
 CBALL::VIEW::ColorUnit
 CBALL::VIEW::ColorUnitHue
 CBALL::VIEW::CompositeManager
 CBALL::VIEW::ConnectionObject
 CBALL::VIEW::Dataset
 CBALL::VIEW::DockResultDialog::Compare_
 CBALL::VIEW::EditOperation
 CBALL::VIEW::FieldLineCreator
 CBALL::VIEW::FrameBuffer
 CBALL::VIEW::FrameBufferFormat
 CBALL::VIEW::GeometricObject
 CBALL::VIEW::GLDisplayList
 CBALL::VIEW::Hotkey
 CBALL::VIEW::IconLoader
 CBALL::VIEW::InputDeviceDriver
 CBALL::VIEW::InputPlugin
 CBALL::VIEW::LightSource
 CBALL::VIEW::MeshBuffer
 CBALL::VIEW::Message
 CBALL::VIEW::ModelInformation
 CBALL::VIEW::ModularWidgetPlugin
 CBALL::VIEW::MultiColorExtension
 CBALL::VIEW::PixelFormat
 CBALL::VIEW::POVRenderer::POVRendererClippingPlane
 CBALL::VIEW::PreferencesEntry
 CBALL::VIEW::PreferencesEntry::ExtendedPreferencesObject
 CBALL::VIEW::PubChemDialog::ParsedResult_
 CBALL::VIEW::QuadMesh::Quadruple
 CBALL::VIEW::RaytraceableGrid
 CBALL::VIEW::Renderer
 CBALL::VIEW::RenderTarget
 CBALL::VIEW::Resolution
 CBALL::VIEW::RTfactRenderer::RTfactData
 CBALL::VIEW::SDWidget::DefaultDefault values for options
 CBALL::VIEW::SDWidget::OptionOption names
 CBALL::VIEW::SnapshotManagerInterface
 CBALL::VIEW::Stage
 CBALL::VIEW::UIOperationMode
 CBALL::VIEW::Vertex
 CBALL::VIEW::Vertex2
 CBALL::VIEW::VIEWPlugin
 CBALL::VIEW::XML3DRenderer::XML3DRendererClippingPlane
 CBALL::Visitor< Host >
 CBALL_DEFAULT_MUTEX_TYPE
 CBALL_DEFAULT_READWRITELOCK_TYPE
 CBALL::BaseIterator< Composite, Composite, Composite *, CompositeIteratorTraits >
 CBALL::BinaryFileAdaptor< BALL_SIZE_TYPE >
 CBALL::BinaryFileAdaptor< char >
 CBALL::BinaryFileAdaptor< double >
 CBALL::BinaryFileAdaptor< float >
 CBALL::BinaryFunctor< T1, T2, Processor::Result >
 Ciostream
 Cenable_shared_from_this
 Cboost::hash< BALL::Quadruple< T1, T2, T3, T4 > >
 Cboost::hash< BALL::SortedPosition2 >
 Cboost::hash< BALL::SortedPosition3 >
 Cboost::hash< BALL::String >
 Cboost::hash< BALL::Triple< T1, T2, T3 > >
 Cboost::hash< RTpieCpp::InstanceHandle >
 Cboost::hash< RTpieCpp::InstanceHandle >::conv
 Cboost::hash< RTpieCpp::MeshHandle >
 Cboost::hash< RTpieCpp::MeshHandle >::conv
 Cmutex
 Cunordered_map
 CBALL::EdgeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE >
 CQuaternion
 CBALL::GraphEdge< RSVertex, RSEdge, RSFace >
 CBALL::GraphEdge< SASVertex, SASEdge, SASFace >
 CBALL::GraphEdge< SESVertex, SESEdge, SESFace >
 CBALL::GraphEdge< TrianglePoint, TriangleEdge, Triangle >
 CBALL::GraphFace< SASVertex, SASEdge, SASFace >
 CBALL::GraphFace< SESVertex, SESEdge, SESFace >
 CBALL::GraphTriangle< RSVertex, RSEdge, RSFace >
 CBALL::GraphTriangle< TrianglePoint, TriangleEdge, Triangle >
 CBALL::GraphVertex< RSVertex, RSEdge, RSFace >
 CBALL::GraphVertex< SASVertex, SASEdge, SASFace >
 CBALL::GraphVertex< SESVertex, SESEdge, SESFace >
 CBALL::GraphVertex< TrianglePoint, TriangleEdge, Triangle >
 CBALL::HashGrid3< BALL::Atom * >
 CBALL::HashGrid3< BALL_INDEX_TYPE >
 CBALL::HashGrid3< const Atom * >
 CBALL::HashGrid3< Sphere_ >
 CBALL::HashGridBox3< BALL::Atom * >
 CBALL::HashGridBox3< BALL_INDEX_TYPE >
 CBALL::HashGridBox3< const Atom * >
 CBALL::HashGridBox3< Sphere_ >
 CBALL::HashSet< BALL::Atom * >
 CBALL::HashSet< BALL::Bond * >
 CBALL::HashSet< BALL::Composite * >
 CBALL::HashSet< BALL::ConnectedToPredicate::CTPNode * >
 CBALL::HashSet< BALL::Residue * >
 CBALL::HashSet< BALL::RSFace * >
 CBALL::HashSet< BALL::RSVertex * >
 CBALL::HashSet< BALL::String >
 CBALL::HashSet< BALL::VIEW::PreferencesEntry * >
 CBALL::HashSet< BALL::VIEW::Representation * >
 CBALL::HashSet< BALL_SIZE_TYPE >
 CBALL::HashSet< const BALL::Atom * >
 CBALL::HashSet< const BALL::Bond * >
 CBALL::HashSet< const BALL::VIEW::Mesh * >
 CBALL::HashSet< const BALL::VIEW::Representation * >
 CBALL::HashSet< const PersistentObject * >
 CBALL::HashSet< Edge * >
 CBALL::HashSet< Element::AtomicNumber >
 CBALL::HashSet< Face * >
 CBALL::HashSet< QAction * >
 CBALL::HashSet< QObject * >
 CBALL::HashSet< RSEdge * >
 CBALL::HashSet< RSFace * >
 CBALL::HashSet< SASEdge * >
 CBALL::HashSet< SASFace * >
 CBALL::HashSet< SESEdge * >
 CBALL::HashSet< SESFace * >
 CBALL::HashSet< String >
 CBALL::HashSet< Triangle * >
 CBALL::HashSet< TriangleEdge * >
 CMolecularGraphBase
 CMutexLockerType
 CMutexType
 CQAbstractListModel
 CQAbstractTableModel
 CQDialog
 CQDockWidget
 CQEvent
 CQGLWidget
 CQItemDelegate
 CQLineEdit
 CQMainWindow
 CQMouseEvent
 CQObject
 CQPaintDevice
 CQPlainTextEdit
 CQPushButton
 CQSyntaxHighlighter
 CQTableView
 CQTableWidget
 CQTextBrowser
 CQThread
 CQTreeWidget
 CQTreeWidgetItem
 CQValidator
 CQWebEnginePage
 CQWebEngineView
 CQWidget
 CReadLockerType
 CReadWriteLockType
 Cbinary_function
 Cstd::exceptionSTL class
 Cstd::ios_baseSTL class
 Cstd::list< T >STL class
 Cstreambuf
 Cstd::vector< T >STL class
 CBALL::TAngle< double >
 CBALL::TAngle< float >
 CBALL::TCircle3< double >
 CBALL::TMatrix4x4< float >
 CBALL::TreeWidth< OriginalGraphType >
 CBALL::TRegularData1D< float >
 CBALL::TRegularData1D< std::complex< ComplexTraits::ComplexPrecision > >
 CBALL::TRegularData2D< float >
 CBALL::TRegularData2D< std::complex< ComplexTraits::ComplexPrecision > >
 CBALL::TRegularData3D< BALL::TVector3 >
 CBALL::TRegularData3D< char >
 CBALL::TRegularData3D< float >
 CBALL::TRegularData3D< std::complex< ComplexTraits::ComplexPrecision > >
 CBALL::TRegularData3D< T >
 CBALL::TSimpleBox3< double >
 CBALL::TSimpleBox3< float >
 CBALL::TSphere3< double >
 CBALL::TSurface< float >
 CBALL::TVector2< float >
 CBALL::TVector3< double >
 CBALL::TVector3< float >
 CFieldLinesDialogData
 CUi_AmberConfigurationDialogData
 CUi_AssignBondOrderConfigurationDialogData
 CUi_AssignBondOrderResultsDialogData
 CUi_AtomOverviewData
 CUi_BondPropertiesData
 CUi_CharmmConfigurationDialogData
 CUi_ClippingDialogData
 CUi_ColoringSettingsDialogData
 CUi_CompositePropertiesData
 CUi_ContourSurfaceDialogData
 CUi_DemoTutorialDialogData
 CUi_DisplayPropertiesData
 CUi_DockDialogData
 CUi_DockProgressDialogData
 CUi_DockResultDialogData
 CUi_DownloadElectronDensityData
 CUi_DownloadPDBFileData
 CUi_EditSettingsData
 CUi_EditSingleShortcutData
 CUi_ExportGeometryDialogData
 CUi_FDPBDialogData
 CUi_GenerateCrystalDialogData
 CUi_GeometricFitDialogData
 CUi_GridVisualizationDialogData
 CUi_HTMLViewErrorWidget
 CUi_LabelDialogData
 CUi_LightSettingsData
 CUi_MainControlPreferencesData
 CUi_MaterialSettingsData
 CUi_MinimizationDialogData
 CUi_MMFF94ConfigurationDialogData
 CUi_ModelSettingsDialogData
 CUi_ModifyRepresentationDialogData
 CUi_MolecularDynamicsDialogData
 CUi_NetworkPreferencesData
 CUi_OpenSavePreferencesData
 CUi_ParsedFunctionDialogData
 CUi_PeptideDialogData
 CUi_PreferencesData
 CUi_PTEDialogData
 CUi_PythonSettingsData
 CUi_RaytraceableContourSurfaceDialogData
 CUi_SetCameraData
 CUi_SetClippingData
 CUi_ShortcutDialogData
 CUi_SnapshotVisualisationDialogData
 CUi_StageSettingsData
 CUi_StereoSettingsDialogData
 CUi_UndoManagerDialogData
 CBALL::UnaryFunctor< Atom, Processor::Result >
 CBALL::UnaryFunctor< AtomContainer, Processor::Result >
 CBALL::UnaryFunctor< BALL::Composite, Processor::Result >
 CBALL::UnaryFunctor< Chain, Processor::Result >
 CBALL::UnaryFunctor< Composite, Processor::Result >
 CBALL::UnaryFunctor< Fragment, Processor::Result >
 CBALL::UnaryFunctor< GeometricObject *, Processor::Result >
 CBALL::UnaryFunctor< Residue, Processor::Result >
 CBALL::UnaryFunctor< T, Processor::Result >
 CBALL::UnaryFunctor< UndirectedGraph, Size >
 CBALL::UnaryFunctor< UndirectedGraph, std::pair< std::vector< boost::graph_traits< UndirectedGraph::vertex_descriptor > >, Size > >
 CBALL::Visitor< Composite >
 CWriteLockerType
 CBALL_INDEX_TYPE
 CBALL_SIZE_TYPE
 Cbool
 Cdouble
 Cfloat
 CPT
 CQMutex
 CQReadWriteLock
 Cbinary_function
 Cpair< Atom *, Atom * >
 Cunary_function
 CValue