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5 #ifndef BALL_STRUCTURE_SECONDARYSTRUCTUREPROCESSOR_H
6 #define BALL_STRUCTURE_SECONDARYSTRUCTUREPROCESSOR_H
12 #ifndef BALL_CONCEPT_COMPOSITE_H
20 class SecondaryStructure;
71 std::vector<std::vector<Position> >
HBonds_;
85 #endif // BALL_STRUCTURE_SECONDARYSTRUCTUREPROCESSOR_H
char setSecondaryStructureType_(SecondaryStructure *ss, char type)
void changeAllXToY_(char X, char Y, String &target)
bool testString2_(const String &s, Size offset)
std::vector< std::vector< int > > posbridges_
void insertTurn_(int turn, int position)
bool testString_(const String &s, Size offset, Size offset_2)
std::vector< std::vector< Position > > HBonds_
Secondary structure extraction from 3D structure.
void compute_()
Compute the secondary structure.
bool testString3_(const String &s, Size offset, char x)