BALL  1.5.0
Class Index
a | b | c | d | e | f | g | h | i | j | k | l | m | n | o | p | q | r | s | t | u | v | w | x | z
  a  
FPTBondOrderStrategy::DPConfig_ (BALL)    Kekuliser (BALL)    ParamFile::ParameterDescription (BALL)    RunPythonThread (BALL::VIEW)   
FPTBondOrderStrategy::DPJoinMapComparator_ (BALL)    KernelPredicate (BALL)    ParsedFunction (BALL)    Stage::RaytracingMaterial (BALL::VIEW)   
AddHydrogenProcessor (BALL)    FPTBondOrderStrategy::DPTable_ (BALL)    KernelPredicate< Atom > (BALL)    PartialBondOrderAssignment (BALL)    ReadLockerType   
Addition (BALL)    GAFFTypeProcessor::Default (BALL)    KernelPredicate< Chain > (BALL)    PartialChargeBase (BALL)    ReadWriteLockType   
AdvancedElectrostatic (BALL)    GeneralizedBornModel::Default (BALL)    KernelPredicate< Fragment > (BALL)    PartialChargeProcessor (BALL)   
  s  
AmberBend (BALL)    GeometricFit::Default (BALL)    KernelPredicate< Molecule > (BALL)    Path (BALL)   
AmberEvaluation (BALL)    GridBasedScoring::Default (BALL)    KernelPredicate< Protein > (BALL)    PB (BALL)    AmberTorsion::SingleAmberTorsion (BALL)   
AmberFF (BALL)    HashGridBox3::DataIteratorTraits (BALL)    KernelPredicate< Residue > (BALL)    PBScoring (BALL)    CharmmTorsion::SingleCharmmTorsion (BALL)   
AmberNonBonded (BALL)    HBondProcessor::Default (BALL)    KGreedyBondOrderStrategy (BALL)    PCMCavFreeEnergyProcessor (BALL)    CIFFile::SaveFrame (BALL)   
AmberStretch (BALL)    HybridisationProcessor::Default (BALL)    KernelParameterError (BALL::QSAR::Exception)    RecordSLTBRG::PartnerAtom (BALL::PDB)    CIFFile::State (BALL)   
AmberTorsion (BALL)    HydrogenBond::Default (BALL)    Kernel (BALL::QSAR)    PDBAtom (BALL)    CosineTorsion::SingleData (BALL)   
AmiraMeshFile (BALL)    HydrogenBondSlick::Default (BALL)    KernelModel (BALL::QSAR)    PDBAtomIteratorTraits (BALL)    CosineTorsion::SingleValues (BALL)   
AnisotropyShiftProcessor (BALL)    IMGDock::Default (BALL)    KNNModel (BALL::QSAR)    PDBFile (BALL)    DockResult::Scoring_ (BALL)   
AntechamberFile (BALL)    KGreedyBondOrderStrategy::Default (BALL)    KPCRModel (BALL::QSAR)    PDBInfo (BALL)    EmpiricalHSShiftProcessor::ShiftHyperSurface_ (BALL)   
AromaticBondsPredicate (BALL)    LennardJones::Data (BALL)    KPLSModel (BALL::QSAR)    PDBRecords (BALL)    SizeUnderflow (BALL::Exception)   
AromaticityProcessor (BALL)    Lipophilic::Default (BALL)   
  l  
Peak (BALL)    ExpressionParser::State (BALL)   
AromaticRingStacking (BALL)    MMFF94::Default (BALL)    PeakList (BALL)    ExpressionParser::SyntaxTree (BALL)   
AssignBaseProcessor (BALL)    MolecularDynamics::Default (BALL)    LennardJones (BALL)    PeptideCapProcessor (BALL)    FPTBondOrderStrategy::DPBackTracking_::StateComparator_ (BALL)   
AssignBondOrderProcessor (BALL)    NonpolarSolvation::Default (BALL)    LinearBaseFunction (BALL)    PeptideBuilder (BALL::Peptides)    GAFFCESParser::State (BALL)   
AssignBondOrderProcessor::Algorithm (BALL)    NumericalSAS::Default (BALL)    LineBasedFile (BALL)    PeriodicBoundary (BALL)    GAMESSDatFile::State (BALL)   
AssignChargeProcessor (BALL)    Pair6_12InteractionEnergyProcessor::Default (BALL)    LineSearch (BALL)    PersistenceManager (BALL)    GAMESSLogFile::State (BALL)   
AssignRadiusProcessor (BALL)    Pair6_12RDFIntegrator::Default (BALL)    Lipophilic (BALL)    PersistentObject (BALL)    INIFile::Section (BALL)   
AssignTypeNameProcessor (BALL)    PairExpInteractionEnergyProcessor::Default (BALL)    List (BALL)    PharmacophoreConstraint (BALL)    LogStreamBuf::StreamStruct (BALL)   
AssignTypeProcessor (BALL)    PairExpRDFIntegrator::Default (BALL)    LogP (BALL)    PiecewiseFunction (BALL)    MMFF94StretchBend::Stretch (BALL)   
AStarBondOrderStrategy (BALL)    PCMCavFreeEnergyProcessor::Default (BALL)    LogStream (BALL)    PiecewisePolynomial (BALL)    MMFF94StretchBend::StretchBend (BALL)   
Atom (BALL)    PDBFile::Default (BALL)    LogStreamBuf (BALL)    PierottiCavFreeEnergyProcessor (BALL)    MOL2File::SetStruct (BALL)   
AtomBijection (BALL)    NameConverter::Default (BALL::Peptides)    LogStreamBuf::LoglineStruct (BALL)    PLP (BALL)    MOL2File::SubstructureStruct (BALL)   
AtomContainer (BALL)    PeriodicBoundary::Default (BALL)    LogStreamNotifier (BALL)    PLPScoring (BALL)    NMRStarFile::Sample (BALL)   
AtomContainerIteratorTraits (BALL)    PierottiCavFreeEnergyProcessor::Default (BALL)    LongDoubleTraits (BALL)    PluginHandler (BALL)    NMRStarFile::SampleCondition (BALL)   
AtomicPolarizabilities (BALL)    PolarSolvation::Default (BALL)    RecordLINK::LinkPartner (BALL::PDB)    PluginManager (BALL)    NMRStarFile::ShiftReferenceElement (BALL)   
AtomInformationContent (BALL)    PoseClustering::Default (BALL)    LatentVariableModel (BALL::QSAR)    Polarity (BALL)    NMRStarFile::ShiftReferenceSet (BALL)   
AtomIteratorTraits (BALL)    Potential1210::Data (BALL)    LDAModel (BALL::QSAR)    PolarSolvation (BALL)    Structure (BALL::PDB)   
AtomNamePredicate (BALL)    QuadraticAngleBend::Data (BALL)    LibsvmModel (BALL::QSAR)    PolarVdWSurface (BALL)    PTE_::SymbolToElement (BALL)   
AtomTypePredicate (BALL)    QuadraticBondStretch::Data (BALL)    LinearModel (BALL::QSAR)    PoseClustering (BALL)    SingularMatrixError (BALL::QSAR::Exception)   
AtomTyper (BALL)    QuadraticImproperTorsion::Data (BALL)    LogitModel (BALL::QSAR)    PoseClustering::PosePointer (BALL)    SNBModel (BALL::QSAR)   
AtomTypes (BALL)    ReissCavFreeEnergyProcessor::Default (BALL)    Label (BALL::VIEW)    PositivePolarVdWSurface (BALL)    Statistics (BALL::QSAR)   
AtomVector (BALL)    ResidueTorsions::Data (BALL)    LabelDialog (BALL::VIEW)    PositiveVdWSurface (BALL)    SVMModel (BALL::QSAR)   
AutoDeletable (BALL)    ScoringFunction::Default (BALL)    LabelModel (BALL::VIEW)    Potential1210 (BALL)    SVRModel (BALL::QSAR)   
AxialPredicate (BALL)    SDGenerator::Default (BALL)    LightSettings (BALL::VIEW)    PreciseTime (BALL)    SASEdge (BALL)   
CanonicalMD::AuxFactors (BALL)    ShiftedLVMMMinimizer::Default (BALL)    LightSource (BALL::VIEW)    PreferencesObject (BALL)    SASFace (BALL)   
CHPI::AromaticRing (BALL)    SideChainPlacementProcessor::Default (BALL)    Line (BALL::VIEW)    PrincipalMomentOfInertia (BALL)    SASTriangulator (BALL)   
CHPISlick::AromaticRing (BALL)    DLArrayHelper (BALL::SimpleDownloaderHelper)    LogEvent (BALL::VIEW)    PrincipalMomentOfInertiaX (BALL)    SASVertex (BALL)   
Composite::AncestorIteratorTraits (BALL)    DLHelper (BALL::SimpleDownloaderHelper)    LogView (BALL::VIEW)    PrincipalMomentOfInertiaY (BALL)    ScoreGridSet (BALL)   
FPTBondOrderStrategy::AdditionalBagProperties_ (BALL)    DLThread (BALL::SimpleDownloaderHelper)    TextEditorWidget::LineNumbers (BALL::VIEW)    PrincipalMomentOfInertiaZ (BALL)    ScoringBaseFunction (BALL)   
FPTBondOrderStrategy::Assignment_ (BALL)    SLICKEnergy::Default (BALL)   
  m  
Processor (BALL)    ScoringComponent (BALL)   
GAFFCESParser::APSMatcher (BALL)    SLICKScore::Default (BALL)    Product (BALL)    ScoringFunction (BALL)   
GAFFCESParser::APSMatcher::APSTerm (BALL)    SnapShotManager::Default (BALL)    HybridisationProcessor::Method (BALL)    PropertyManager (BALL)    ScoringOptimizer (BALL)   
HybridisationProcessor::AtomNames_ (BALL)    StrangLBFGSMinimizer::Default (BALL)    Mainframe (BALL)    Protein (BALL)    SCWRLRotamerFile (BALL)   
MicroCanonicalMD::AuxFactors (BALL)    UhligCavFreeEnergyProcessor::Default (BALL)    MeanAtomInformationContent (BALL)    ProteinIteratorTraits (BALL)    SDFile (BALL)   
MMFF94AtomTyper::AromaticType (BALL)    VanDerWaalsSlick::Default (BALL)    MicroCanonicalMD (BALL)    ProteinPredicate (BALL)    SDGenerator (BALL)   
MOL2File::AtomStruct (BALL)    Dataset (BALL::VIEW)    MMFF94 (BALL)    PTE_ (BALL)    SecondaryStructure (BALL)   
MOLFile::AtomStruct (BALL)    DatasetControl (BALL::VIEW)    MMFF94AtomType (BALL)    PubChemDownloader (BALL)    SecondaryStructureIteratorTraits (BALL)   
AdditionalAtomInfo (BALL::PDB)    DatasetController (BALL::VIEW)    MMFF94AtomTypeEquivalences (BALL)    PyCAPIKernel (BALL)    SecondaryStructurePredicate (BALL)   
Structure::AtomEntry (BALL::PDB)    DatasetMessage (BALL::VIEW)    MMFF94AtomTyper (BALL)    PyColorRGBAVector (BALL)    SecondaryStructureProcessor (BALL)   
AminoAcidDescriptor (BALL::Peptides)    DemoTutorialDialog (BALL::VIEW)    MMFF94AtomTypes (BALL)    PyCompositeList (BALL)    Selectable (BALL)   
ALLModel (BALL::QSAR)    DeselectControlsMessage (BALL::VIEW)    MMFF94BendParameters (BALL)    PyDatasetVector (BALL)    SelectedPredicate (BALL)   
AutomaticModelCreator (BALL::QSAR)    DeviceEvent (BALL::VIEW)    MMFF94ChargeProcessor (BALL)    PyIndexList (BALL)    Selector (BALL)   
SDGenerator::AtomComparator (BALL)    Disc (BALL::VIEW)    MMFF94ESParameters (BALL)    PyInterpreter (BALL)    SESComputer (BALL)   
AddBackboneModel (BALL::VIEW)    DisplayProperties (BALL::VIEW)    MMFF94NonBonded (BALL)    PyKernel (BALL)    SESEdge (BALL)   
AddBallAndStickModel (BALL::VIEW)    DockDialog (BALL::VIEW)    MMFF94OutOfPlaneBend (BALL)    PyServer (BALL)    SESFace (BALL)   
AddCartoonModel (BALL::VIEW)    DockingController (BALL::VIEW)    MMFF94ParametersBase (BALL)    PropertyError (BALL::QSAR::Exception)    SESSingularityCleaner (BALL)   
AddLineModel (BALL::VIEW)    DockingFinishedMessage (BALL::VIEW)    MMFF94PlaneParameters (BALL)    PCRModel (BALL::QSAR)    SESTriangulator (BALL)   
AddSurfaceModel (BALL::VIEW)    DockingThread (BALL::VIEW)    MMFF94StretchBend (BALL)    PLSModel (BALL::QSAR)    SESVertex (BALL)   
AddVanDerWaalsModel (BALL::VIEW)    DockProgressDialog (BALL::VIEW)    MMFF94StretchBendParameters (BALL)    PredictionConfiguration (BALL::QSAR)    ShiftedLVMMMinimizer (BALL)   
AmberConfigurationDialog (BALL::VIEW)    DockResultController (BALL::VIEW)    MMFF94StretchParameters (BALL)    RingPerceptionProcessor::PathMessage_ (BALL)    ShiftModel (BALL)   
AnimationThread (BALL::VIEW)    DockResultDialog (BALL::VIEW)    MMFF94Torsion (BALL)    RSComputer::ProbePosition (BALL)    ShiftModel1D (BALL)   
AssignBondOrderConfigurationDialog (BALL::VIEW)    DockWidget (BALL::VIEW)    MMFF94TorsionParameters (BALL)    SESSingularityCleaner::ProbeIntersection (BALL)    ShiftModel2D (BALL)   
AssignBondOrderResultsDialog (BALL::VIEW)    DoubleEditorWidget (BALL::VIEW)    MMFF94VDWParameters (BALL)    SmartsParser::SPAtom::Property (BALL)    ShiftModule (BALL)   
AtomBondModelBaseProcessor (BALL::VIEW)    DownloadElectronDensity (BALL::VIEW)    MMScoring (BALL)    SmartsParser::SPAtom::PropertyValue (BALL)    SideChainOptimizer (BALL)   
AtomChargeColorProcessor (BALL::VIEW)    DownloadPDBFile (BALL::VIEW)    MOL2File (BALL)    ParsedFunctionDialog (BALL::VIEW)    SideChainPlacementProcessor (BALL)   
AtomDistanceColorProcessor (BALL::VIEW)    DragLogView (BALL::VIEW)    MOL2File::MoleculeStruct (BALL)    PDBInfoEditorWidget (BALL::VIEW)    SimpleBase (BALL)   
AtomOverview (BALL::VIEW)    GLDisplayList::DisplayListRedeclaration (BALL::VIEW)    MolecularDynamics (BALL)    PeptideDialog (BALL::VIEW)    SimpleDownloader (BALL)   
AtomOverview::ApplyProcessor (BALL::VIEW)    SDWidget::Default (BALL::VIEW)    MolecularGraph (BALL)    PickingMode (BALL::VIEW)    SimpleExperiment1D (BALL)   
  b  
  e  
MolecularInformation (BALL)    PixelFormat (BALL::VIEW)    SingleBondsPredicate (BALL)   
MolecularInteractions (BALL)    PluginDialog (BALL::VIEW)    SizeOfSSSR (BALL)   
Atom::BondIteratorTraits (BALL)    EdgeItem (BALL)    MolecularSimilarity (BALL)    PluginDirectoryModel (BALL::VIEW)    SLICKEnergy (BALL)   
BackBonePredicate (BALL)    EFShiftProcessor (BALL)    MolecularWeight (BALL)    PluginModel (BALL::VIEW)    SLICKScore (BALL)   
BalabanIndexJ (BALL)    Electrostatic (BALL)    Molecule (BALL)    Point (BALL::VIEW)    SmartsMatcher (BALL)   
BALLPlugin (BALL)    ElectrostaticPotentialCalculator (BALL)    MoleculeIteratorTraits (BALL)    PositionColorProcessor (BALL::VIEW)    SmartsParser (BALL)   
BaseIterator (BALL)    Element (BALL)    MoleculeObjectCreator (BALL)    POVRenderer (BALL::VIEW)    SmartsParser::SPAtom (BALL)   
BendComponent (BALL)    ElementPredicate (BALL)    MoleculePredicate (BALL)    POVRenderer::POVRendererClippingPlane (BALL::VIEW)    SmartsParser::SPBond (BALL)   
BidirectionalIterator (BALL)    Embeddable (BALL)    MOLFile (BALL)    Preferences (BALL::VIEW)    SmartsParser::SPEdge (BALL)   
BinaryFileAdaptor (BALL)    EmpiricalHSShiftProcessor (BALL)    MolFileFactory (BALL)    PreferencesEntry (BALL::VIEW)    SmartsParser::SPNode (BALL)   
BinaryFingerprintMethods (BALL)    EnergeticEvaluation (BALL)    MOPACInputFile (BALL)    PropDeleteWidget (BALL::VIEW)    SmartsParser::State (BALL)   
BinaryFunctor (BALL)    EnergyMinimizer (BALL)    MOPACOutputFile (BALL)    PropEditorWidget (BALL::VIEW)    SMARTSPredicate (BALL)   
BinaryPredicate (BALL)    EnergyProcessor (BALL)    MPISupport (BALL)    PropertyEditor (BALL::VIEW)    SmilesParser (BALL)   
BinaryProcessor (BALL)    Enumerator (BALL)    MutableConstant (BALL)    PTEDialog (BALL::VIEW)    SmilesParser::SPAtom (BALL)   
BindingPocketProcessor (BALL)    EnumeratorIndex (BALL)    MutablePower (BALL)    PubChemDialog (BALL::VIEW)    SmilesParser::SPBond (BALL)   
Bit (BALL)    EvolutionaryDocking (BALL)    Mutator (BALL)    PubChemDialog::ParsedResult_ (BALL::VIEW)    SmilesParser::State (BALL)   
BitVector (BALL)    Experiment (BALL)    NMRStarFile::MolecularSystem (BALL)    PythonHighlighter (BALL::VIEW)    SnapShot (BALL)   
Bond (BALL)    Expression (BALL)    NMRStarFile::MonomericPolymer (BALL)    PythonSettings (BALL::VIEW)    SnapShotManager (BALL)   
BondOrderAssignment (BALL)    ExpressionParser (BALL)    ModelParameterError (BALL::QSAR::Exception)    PythonValidator (BALL::VIEW)    Solvation (BALL)   
BondOrderAssignmentStrategy (BALL)    ExpressionPredicate (BALL)    MLRModel (BALL::QSAR)    PyWidget (BALL::VIEW)    SolventAccessibleSurface (BALL)   
BondPolarizabilities (BALL)    ExpressionTree (BALL)    Model (BALL::QSAR)   
  q  
SolventAtomDescriptor (BALL)   
BoundingBoxProcessor (BALL)    FPTBondOrderStrategy::EdgeComparator_ (BALL)    ModelConfiguration (BALL::QSAR)    SolventDescriptor (BALL)   
BranchAndBoundBondOrderStrategy (BALL)    EditableEdgeCopier (BALL::GRAPH)    ModelFactory (BALL::QSAR)    QSARData (BALL::QSAR)    SolventExcludedSurface (BALL)   
Bruker1DFile (BALL)    EditableVertexCopier (BALL::GRAPH)    SideChainPlacementProcessor::Method (BALL)    QuadraticAngleBend (BALL)    SolventParameter (BALL)   
Bruker2DFile (BALL)    HybridisationProcessor::Elements_ (BALL)    TreeWidthImplementation::MinorMinWidthCriterion (BALL)    QuadraticBondStretch (BALL)    SolventPredicate (BALL)   
BuildBondsProcessor (BALL)    MMFF94StretchParameters::EmpiricalBondData (BALL)    TreeWidthImplementation::MinorMinWidthReducer (BALL)    QuadraticImproperTorsion (BALL)    SortedPosition2 (BALL)   
BurialDepth (BALL)    NMRStarFile::EntryInformation (BALL)    AddBackboneModel::ModelPart (BALL::VIEW)    Quadruple (BALL)    SortedPosition3 (BALL)   
BuriedPolar (BALL)    RecordDBREF::EndingDatabaseSegment (BALL::PDB)    MainControl (BALL::VIEW)    QuaternionGene (BALL)    Sp2HybridizedPredicate (BALL)   
BufferOverflow (BALL::Exception)    RecordDBREF::EndingSequence (BALL::PDB)    MainControlPreferences (BALL::VIEW)    QuaternionParameter (BALL)    Sp3HybridizedPredicate (BALL)   
FDPB::Boundary (BALL)    EditMode (BALL::VIEW)    MaterialSettings (BALL::VIEW)    TreeWidthImplementation::QuickBB (BALL)    SpaceGroupParameters (BALL)   
FPTBondOrderStrategy::BackTrackingState_ (BALL)    EditOperation (BALL::VIEW)    MDSimulationThread (BALL::VIEW)    TreeWidthImplementation::QuickBB::QuickBBState (BALL)    Spectrum (BALL)   
FragmentDB::BuildBondsProcessor (BALL)    EditSettings (BALL::VIEW)    Mesh (BALL::VIEW)    QuadMesh (BALL::VIEW)    SpHybridizedPredicate (BALL)   
GAMESSDatFile::block (BALL)    EditSingleShortcut (BALL::VIEW)    MeshBuffer (BALL::VIEW)    QuadMesh::Quadruple (BALL::VIEW)    SquareFunction (BALL)   
HashGrid3::BoxIteratorTraits (BALL)    ElementColorProcessor (BALL::VIEW)    Message (BALL::VIEW)    QAbstractListModel    StaticLigandFragment (BALL)   
HashGridBox3::BoxIteratorTraits (BALL)    EnergyMinimizerThread (BALL::VIEW)    MessageEvent (BALL::VIEW)    QAbstractTableModel    SteepestDescentMinimizer (BALL)   
MMFF94StretchBend::Bend (BALL)    ExportGeometryDialog (BALL::VIEW)    MinimizationDialog (BALL::VIEW)    QDialog    StrangLBFGSMinimizer (BALL)   
MMFF94StretchParameters::BondData (BALL)    PreferencesEntry::ExtendedPreferencesObject (BALL::VIEW)    MMFF94ConfigurationDialog (BALL::VIEW)    QDockWidget    StretchComponent (BALL)   
MOL2File::BondStruct (BALL)   
  f  
ModelInformation (BALL::VIEW)    QEvent    String (BALL)   
MOLFile::BondStruct (BALL)    ModelProcessor (BALL::VIEW)    QGLWidget    StringHashMap (BALL)   
NMRStarFile::BALLToBMRBMapper (BALL)    FileNotFound (BALL::Exception)    ModelSettingsDialog (BALL::VIEW)    QItemDelegate    StructureMapper (BALL)   
BookKeeping (BALL::PDB)    FormatUnsupported (BALL::Exception)    ModifyRepresentationDialog (BALL::VIEW)    QLineEdit    StructurePreparer (BALL)   
BayesModel (BALL::QSAR)    Factory (BALL)    ModularWidget (BALL::VIEW)    QMainWindow    Substring (BALL)   
BasicHelper (BALL::SimpleDownloaderHelper)    FalsePredicate (BALL)    ModularWidgetPlugin (BALL::VIEW)    QMouseEvent    Subtraction (BALL)   
TreeWidth::BagContentWriter (BALL)    FDPB (BALL)    ModularWidgetPluginHandler (BALL::VIEW)    QObject    SurfaceBase (BALL)   
TRegularData1D::BlockValueType (BALL)    FDPB::FastAtomStruct (BALL)    MolecularControl (BALL::VIEW)    QPaintDevice    SurfaceProcessor (BALL)   
TRegularData2D::BlockValueType (BALL)    FermiBaseFunction (BALL)    MolecularDynamicsDialog (BALL::VIEW)    QPlainTextEdit    System (BALL)   
TRegularData3D::BlockValueType (BALL)    File (BALL)    MolecularFileDialog (BALL::VIEW)    QPushButton    Scene (BALL::VIEW)   
BALLThread (BALL::VIEW)    FileSystem (BALL)    MolecularStructure (BALL::VIEW)    QSyntaxHighlighter    SceneMessage (BALL::VIEW)   
BondProperties (BALL::VIEW)    FlexDefinition (BALL)    MolecularTaskMessage (BALL::VIEW)    QTableView    SDWidget (BALL::VIEW)   
BoolEditorWidget (BALL::VIEW)    FlexibleMolecule (BALL)    MoleculeColorProcessor (BALL::VIEW)    QTableWidget    SecondaryStructureColorProcessor (BALL::VIEW)   
Box (BALL::VIEW)    FloatTraits (BALL)    MotionTrackingEvent (BALL::VIEW)    QTextBrowser    ServerPreferences (BALL::VIEW)   
BufferedRenderer (BALL::VIEW)    ForceField (BALL)    MoveMode (BALL::VIEW)    QThread    ServerWidget (BALL::VIEW)   
ButtonEvent (BALL::VIEW)    ForceFieldComponent (BALL)    MultiColorExtension (BALL::VIEW)    QTreeWidget    SetCamera (BALL::VIEW)   
ServerWidget::BALLViewServer (BALL::VIEW)    ForceFieldEvaluation (BALL)    MultiLine (BALL::VIEW)    QTreeWidgetItem    SetClippingPlane (BALL::VIEW)   
  c  
ForceFieldParameters (BALL)    MyTextBrowser (BALL::VIEW)    QValidator    ShortcutDialog (BALL::VIEW)   
FormalCharge (BALL)    Stage::Material (BALL::VIEW)    QWebEnginePage    ShortcutRegistry (BALL::VIEW)   
CanonicalMD (BALL)    ForwardIterator (BALL)    MolecularGraphBase    QWebEngineView    ShortcutTableModel (BALL::VIEW)   
CCP4File (BALL)    FPTBondOrderStrategy (BALL)    MutexLockerType    QWidget    ShortcutTableView (BALL::VIEW)   
Chain (BALL)    FPTBondOrderStrategy::FPTBondOrderAssignment_ (BALL)    MutexType   
  r  
ShowDisplayPropertiesMessage (BALL::VIEW)   
ChainIteratorTraits (BALL)    Fragment (BALL)   
  n  
ShowHelpMessage (BALL::VIEW)   
ChainPredicate (BALL)    FragmentationalSolvation (BALL)    RingProcessorException (BALL::Exception)    SimpleBox (BALL::VIEW)   
ChargePredicate (BALL)    FragmentDB (BALL)    Bond::NotBound (BALL)    GeometricFit::RotationAngles_ (BALL)    SimulationThread (BALL::VIEW)   
ChargeRuleProcessor (BALL)    FragmentDistanceCollector (BALL)    Client::NoPersistentObject (BALL)    HBondProcessor::ResidueData (BALL)    SnapshotManagerInterface (BALL::VIEW)   
CharmmBend (BALL)    FragmentIteratorTraits (BALL)    NoBufferAvailable (BALL::Exception)    JohnsonBoveyShiftProcessor::Ring (BALL)    SnapshotVisualisationDialog (BALL::VIEW)   
CharmmEEF1 (BALL)    FresnoTypes (BALL)    NotImplemented (BALL::Exception)    NMRStarFile::MolecularSystem::RelatedDB (BALL)    Sphere (BALL::VIEW)   
CharmmFF (BALL)    FeatureSelectionParameterError (BALL::QSAR::Exception)    NotInitialized (BALL::Exception)    RecordANISOU (BALL::PDB)    Stage (BALL::VIEW)   
CharmmImproperTorsion (BALL)    FeatureSelection (BALL::QSAR)    NullPointer (BALL::Exception)    RecordATOM (BALL::PDB)    StageSettings (BALL::VIEW)   
CharmmNonBonded (BALL)    FeatureSelectionConfiguration (BALL::QSAR)    FragmentDB::NoFragmentNode (BALL)    RecordAUTHOR (BALL::PDB)    StereoSettingsDialog (BALL::VIEW)   
CharmmStretch (BALL)    TreeWidthImplementation::FillInHeuristic (BALL)    FragmentDB::NormalizeNamesProcessor (BALL)    RecordCAVEAT (BALL::PDB)    STLRenderer (BALL::VIEW)   
CharmmTorsion (BALL)    TriangulatedSphere::Face (BALL)    HashSet::Node (BALL)    RecordCISPEP (BALL::PDB)    StringEditorWidget (BALL::VIEW)   
CHPI (BALL)    FakeDriver (BALL::VIEW)    MMFF94NonBonded::NonBondedPairData (BALL)    RecordCOMPND (BALL::PDB)    SyncClippingPlanesMessage (BALL::VIEW)   
CHPI::CHGroup (BALL)    FDPBDialog (BALL::VIEW)    NamedProperty (BALL)    RecordCON06 (BALL::PDB)   
  t  
CHPISlick (BALL)    FieldLineCreator (BALL::VIEW)    NegativePolarVdWSurface (BALL)    RecordCON061 (BALL::PDB)   
CHPISlick::CHGroup (BALL)    FieldLinesDialog (BALL::VIEW)    NegativeVdWSurface (BALL)    RecordCON062 (BALL::PDB)    TooManyBonds (BALL::Exception)   
CIFFile (BALL)    FileObserver (BALL::VIEW)    NMRStarFile (BALL)    RecordCON063 (BALL::PDB)    TooManyErrors (BALL::Exception)   
ClaverieParameter (BALL)    FinishedSimulationMessage (BALL::VIEW)    NMRStarFile::NMRAtomData (BALL)    RecordCON064 (BALL::PDB)    GAFFCESParser::TruePredicate (BALL)   
ClearChargeProcessor (BALL)    FloatEditorWidget (BALL::VIEW)    NMRStarFile::NMRAtomDataSet (BALL)    RecordCONECT (BALL::PDB)    GAFFTypeProcessor::TypeDefinition (BALL)   
ClearRadiusProcessor (BALL)    ForceColorProcessor (BALL::VIEW)    NMRStarFile::NMRSpectrometer (BALL)    RecordCRYST1 (BALL::PDB)    MMFF94Torsion::Torsion (BALL)   
ClearShiftProcessor (BALL)    ForceModel (BALL::VIEW)    NodeItem (BALL)    RecordDBREF (BALL::PDB)    TooManyPLSComponents (BALL::QSAR::Exception)   
Client (BALL)    FrameBuffer (BALL::VIEW)    NonpolarSolvation (BALL)    RecordEND (BALL::PDB)    RingPerceptionProcessor::TNode_ (BALL)   
CommandlineParser (BALL)    FrameBufferFormat (BALL::VIEW)    NucleicAcid (BALL)    RecordENDMDL (BALL::PDB)    RMSDMinimizer::TooFewCoordinates (BALL)   
Comparator (BALL)   
  g  
NucleicAcidIteratorTraits (BALL)    RecordEXPDTA (BALL::PDB)    TAngle (BALL)   
ComposedEnergyProcessor (BALL)    NucleicAcidPredicate (BALL)    RecordFORMUL (BALL::PDB)    TBox3 (BALL)   
Composite (BALL)    GeneralException (BALL::Exception)    Nucleotide (BALL)    RecordFTNOTE (BALL::PDB)    TCircle3 (BALL)   
Composite::ChildCompositeIteratorTraits (BALL)    GlobalExceptionHandler (BALL::Exception)    NucleotideIteratorTraits (BALL)    RecordHEADER (BALL::PDB)    TContour (BALL)   
Composite::CompositeIteratorTraits (BALL)    GAFFCESParser (BALL)    NucleotideMapping (BALL)    RecordHELIX (BALL::PDB)    TContourLine (BALL)   
CompositeIteratorTraits (BALL)    GAFFTypeProcessor (BALL)    NucleotidePredicate (BALL)    RecordHET (BALL::PDB)    TContourSurface (BALL)   
Conformation (BALL)    GAMESSDatFile (BALL)    NumberOfAromaticAtoms (BALL)    RecordHETATM (BALL::PDB)    TCPIOStream (BALL)   
Conformation4C1Predicate (BALL)    GAMESSLogFile (BALL)    NumberOfAromaticBonds (BALL)    RecordHETNAM (BALL::PDB)    TCPServer (BALL)   
ConformationSet (BALL)    GeneralizedBornModel (BALL)    NumberOfAtoms (BALL)    RecordHETSYN (BALL::PDB)    TCPServerThread (BALL)   
ConjugateGradientMinimizer (BALL)    GenericGene (BALL)    NumberOfBonds (BALL)    RecordHYDBND (BALL::PDB)    Templates (BALL)   
ConnectedComponentsProcessor (BALL)    GenericMolFile (BALL)    NumberOfBondsPredicate (BALL)    RecordJRNL (BALL::PDB)    TextPersistenceManager (BALL)   
ConnectedToPredicate (BALL)    GenericParameter (BALL)    NumberOfBoron (BALL)    RecordKEYWDS (BALL::PDB)    TFFT1D (BALL)   
ConnectedToPredicate::CTPNode (BALL)    GeneticAlgorithm (BALL)    NumberOfBromine (BALL)    RecordLINK (BALL::PDB)    TFFT2D (BALL)   
ConnectivityBase (BALL)    GeneticIndividual (BALL)    NumberOfCarbon (BALL)    RecordMASTER (BALL::PDB)    TFFT3D (BALL)   
Constant (BALL)    GeometricCenterProcessor (BALL)    NumberOfChlorine (BALL)    RecordMODEL (BALL::PDB)    Timer (BALL)   
ConstantFunction (BALL)    GeometricFit (BALL)    NumberOfDoubleBonds (BALL)    RecordMODRES (BALL::PDB)    TimeStamp (BALL)   
ConstBidirectionalIterator (BALL)    GlobalInitializer (BALL)    NumberOfFlourine (BALL)    RecordMTRIX1 (BALL::PDB)    TLine3 (BALL)   
ConstBinaryProcessor (BALL)    Gradient (BALL)    NumberOfHeavyAtoms (BALL)    RecordMTRIX2 (BALL::PDB)    TMatrix4x4 (BALL)   
ConstForwardIterator (BALL)    GraphTraits (BALL::GRAPH)    NumberOfHeavyBonds (BALL)    RecordMTRIX3 (BALL::PDB)    TMutex (BALL)   
Constraint (BALL)    GraphEdge (BALL)    NumberOfHydrogen (BALL)    RecordOBSLTE (BALL::PDB)    TMutex< boost::mutex > (BALL)   
ConstRandomAccessIterator (BALL)    GraphFace (BALL)    NumberOfHydrogenBondAcceptors (BALL)    RecordORIGX1 (BALL::PDB)    TMutex< QMutex > (BALL)   
ConstUnaryProcessor (BALL)    GraphTriangle (BALL)    NumberOfHydrogenBondDonors (BALL)    RecordORIGX2 (BALL::PDB)    TMutexLocker (BALL)   
CosineTorsion (BALL)    GraphVertex (BALL)    NumberOfHydrophobicAtoms (BALL)    RecordORIGX3 (BALL::PDB)    TotalNegativePartialCharge (BALL)   
CreateSpectrumProcessor (BALL)    GridAnalysis (BALL)    NumberOfIodine (BALL)    RecordREMARK (BALL::PDB)    TotalPositivePartialCharge (BALL)   
CrystalGenerator (BALL)    GridBasedScoring (BALL)    NumberOfNitrogen (BALL)    RecordREVDAT (BALL::PDB)    TPlane3 (BALL)   
CrystalInfo (BALL)    GridBasedScoring::GridSetsResult (BALL)    NumberOfOxygen (BALL)    RecordSCALE1 (BALL::PDB)    TQuaternion (BALL)   
CubicFunction (BALL)    GridedMM (BALL)    NumberOfPhosphorus (BALL)    RecordSCALE2 (BALL::PDB)    TrajectoryFile (BALL)   
CubicSpline1D (BALL)    GridedPLP (BALL)    NumberOfRotatableBonds (BALL)    RecordSCALE3 (BALL::PDB)    TrajectoryFileFactory (BALL)   
CubicSpline2D (BALL)    GPModel (BALL::QSAR)    NumberOfRotatableSingleBonds (BALL)    RecordSEQADV (BALL::PDB)    TransformationManager (BALL)   
DockResult::Compare_ (BALL)    TreeWidthImplementation::GeneralLowerBoundAlgorithm (BALL)    NumberOfSingleBonds (BALL)    RecordSEQRES (BALL::PDB)    TransformationProcessor (BALL)   
CUDAError (BALL::Exception)    TreeWidthImplementation::GreedyX (BALL)    NumberOfSulfur (BALL)    RecordSHEET (BALL::PDB)    TranslationProcessor (BALL)   
FDPB::ChargeDistribution (BALL)    GenerateCrystalDialog (BALL::VIEW)    NumberOfTripleBonds (BALL)    RecordSIGATM (BALL::PDB)    TReadLocker (BALL)   
File::CannotWrite (BALL)    GenerateCrystalThread (BALL::VIEW)    NumericalIntegrator (BALL)    RecordSIGUIJ (BALL::PDB)    TReadWriteLock (BALL)   
FPTBondOrderStrategy::ComputingData_ (BALL)    GenericControl (BALL::VIEW)    NumericalSAS (BALL)    RecordSITE (BALL::PDB)    TReadWriteLock< QReadWriteLock > (BALL)   
FragmentDB::BuildBondsProcessor::Connection (BALL)    GenericSelectionMessage (BALL::VIEW)    Structure::NCSMatrix (BALL::PDB)    RecordSLTBRG (BALL::PDB)    TreeWidth (BALL)   
GAFFCESParser::CESelementConnectionPredicate (BALL)    GeometricControl (BALL::VIEW)    NameConverter (BALL::Peptides)    RecordSOURCE (BALL::PDB)    TreeWidthImplementation (BALL)   
GAFFCESParser::CESelementPredicate (BALL)    GeometricFitDialog (BALL::VIEW)    PLP::NonBondedPairData (BALL)    RecordSPRSDE (BALL::PDB)    TreeWidthImplementation::TreeDecompositionBuilder (BALL)   
GAFFCESParser::CESPredicate (BALL)    GeometricObject (BALL::VIEW)    NoPCAVariance (BALL::QSAR::Exception)    RecordSSBOND (BALL::PDB)    TRegularData1D (BALL)   
GAFFCESParser::CESwildcardsConnectionPredicate (BALL)    GeometricObjectSelectionMessage (BALL::VIEW)    NBModel (BALL::QSAR)    RecordTER (BALL::PDB)    TRegularData2D (BALL)   
GAFFCESParser::CESwildcardsPredicate (BALL)    GLDisplayList (BALL::VIEW)    NonLinearModel (BALL::QSAR)    RecordTITLE (BALL::PDB)    TRegularData3D (BALL)   
MOL2File::CommentStruct (BALL)    GLOffscreenTarget (BALL::VIEW)    ColorUnit::NotInHexFormat (BALL::VIEW)    RecordTURN (BALL::PDB)    Triangle (BALL)   
MOLFile::CountsStruct (BALL)    GLRenderer (BALL::VIEW)    GLDisplayList::NestedDisplayList (BALL::VIEW)    RecordTVECT (BALL::PDB)    TriangleEdge (BALL)   
NMRStarFile::MolecularSystem::ChemicalUnit (BALL)    GLRenderWindow (BALL::VIEW)    GLDisplayList::NoDisplayListAvailable (BALL::VIEW)    RecordTypeFormat (BALL::PDB)    TrianglePoint (BALL)   
NMRStarFile::Sample::Component (BALL)    GridColorWidget (BALL::VIEW)    NetworkPreferences (BALL::VIEW)    RecordUNKNOWN (BALL::PDB)    TriangulatedSAS (BALL)   
Structure::ConectAtomList (BALL::PDB)    GridVisualisation (BALL::VIEW)    NewSelectionMessage (BALL::VIEW)    Residue (BALL::PDB)    TriangulatedSES (BALL)   
PoseClustering::ClusterProperties (BALL)    GridVisualizationDialog (BALL::VIEW)    NotificationEvent (BALL::VIEW)    PoseClustering::RigidTransformation (BALL)    TriangulatedSphere (BALL)   
PoseClustering::ClusterTreeNodeComparator (BALL)   
  h  
ServerWidget::NotCompositeObject (BALL::VIEW)    Registry (BALL::QSAR)    TriangulatedSurface (BALL)   
PoseClustering::ClusterTreeWriter_ (BALL)   
  o  
RegistryEntry (BALL::QSAR)    Triple (BALL)   
ClassificationModel (BALL::QSAR)    AStarBondOrderStrategy::Heuristic (BALL)    RegressionModel (BALL::QSAR)    TripleBondsPredicate (BALL)   
ClassificationValidation (BALL::QSAR)    HaighMallionShiftProcessor (BALL)    AmberFF::Option (BALL)    RegressionValidation (BALL::QSAR)    TRRFile (BALL)   
ConfigIO (BALL::QSAR)    HashGrid3 (BALL)    AromaticityProcessor::Option (BALL)    RRModel (BALL::QSAR)    TRRFile::TRRHeader (BALL)   
ConfigurationReadingError (BALL::QSAR::Exception)    HashGridBox3 (BALL)    AromaticRingStacking::Option (BALL)    RadialDistributionFunction (BALL)    TruePredicate (BALL)   
StaticLigandFragment::Connection (BALL)    HashMap (BALL)    AssignBondOrderProcessor::Option (BALL)    RadiusRuleProcessor (BALL)    TSimpleBox3 (BALL)   
TContourSurface::Cube (BALL)    HashSet (BALL)    AStarBondOrderStrategy::Option (BALL)    RandomAccessIterator (BALL)    TSimpleMolecularGraph (BALL)   
TreeWidth::ComponentFilter_ (BALL)    HBondProcessor (BALL)    BinaryFingerprintMethods::Option (BALL)    RandomCoilShiftProcessor (BALL)    TSphere3 (BALL)   
CalculateFDPBThread (BALL::VIEW)    HBondProcessor::HBond (BALL)    BindingPocketProcessor::Option (BALL)    RandomEvaluation (BALL)    TSurface (BALL)   
Camera (BALL::VIEW)    HBondShiftProcessor (BALL)    BranchAndBoundBondOrderStrategy::Option (BALL)    RDFIntegrator (BALL)    TSurface::Triangle (BALL)   
ChainColorProcessor (BALL::VIEW)    HINFile (BALL)    BuildBondsProcessor::Option (BALL)    RDFParameter (BALL)    TVector2 (BALL)   
ChannelFormat (BALL::VIEW)    HMOFile (BALL)    BuriedPolar::Option (BALL)    RDFSection (BALL)    TVector3 (BALL)   
CharmmConfigurationDialog (BALL::VIEW)    HMOFile::HMOCharge (BALL)    CharmmFF::Option (BALL)    Receptor (BALL)    TVector4 (BALL)   
ClippingDialog (BALL::VIEW)    HybridisationProcessor (BALL)    CHPI::Option (BALL)    Reciprocal (BALL)    TWriteLocker (BALL)   
ClippingPlane (BALL::VIEW)    HydrogenBond (BALL)    CHPISlick::Option (BALL)    ReconstructFragmentProcessor (BALL)    TypenameRuleProcessor (BALL)   
ColorButton (BALL::VIEW)    HydrogenBondSlick (BALL)    ConjugateGradientMinimizer::Option (BALL)    ReducedSurface (BALL)    TypeRuleProcessor (BALL)   
ColorByGridProcessor (BALL::VIEW)    HydrophobicVdWSurface (BALL)    CrystalGenerator::Option (BALL)    ReferenceArea (BALL)    TemperatureFactorColorProcessor (BALL::VIEW)   
ColorExtension2 (BALL::VIEW)    NMRStarFile::MonomericPolymer::HomologDB (BALL)    CrystalInfo::Option (BALL)    RegularExpression (BALL)    TestFramework (BALL::VIEW)   
ColorHSV (BALL::VIEW)    RecordHYDBND::HydrogenAtom (BALL::PDB)    ElectrostaticPotentialCalculator::Option (BALL)    ReissCavFreeEnergyProcessor (BALL)    TextEditorWidget (BALL::VIEW)   
ColoringSettingsDialog (BALL::VIEW)    RecordHYDBND::HydrogenPartnerAtom (BALL::PDB)    EmpiricalHSShiftProcessor::Option (BALL)    RelHydrophobicVdWSurface (BALL)    TilingRenderer (BALL::VIEW)   
ColorMap (BALL::VIEW)    HelperThread (BALL::SimpleDownloaderHelper)    EnergyMinimizer::Option (BALL)    RelNegativePartialCharge (BALL)    TrajectoryController (BALL::VIEW)   
ColorProcessor (BALL::VIEW)    HBondModelProcessor (BALL::VIEW)    EvolutionaryDocking::Option (BALL)    RelNegativePolarVdWSurface (BALL)    TransformationEvent6D (BALL::VIEW)   
ColorRGBA (BALL::VIEW)    HeadTrackingEvent (BALL::VIEW)    OutOfGrid (BALL::Exception)    RelNegativeVdWSurface (BALL)    TransformationMessage (BALL::VIEW)   
ColorTable (BALL::VIEW)    HelpViewer (BALL::VIEW)    OutOfMemory (BALL::Exception)    RelNumberOfRotatableBonds (BALL)    TreeWidget (BALL::VIEW)   
ColorUnit (BALL::VIEW)    Hotkey (BALL::VIEW)    OutOfRange (BALL::Exception)    RelNumberOfRotatableSingleBonds (BALL)    TRenderWindow (BALL::VIEW)   
ColorUnitHue (BALL::VIEW)    HotkeyTable (BALL::VIEW)    FDPB::Option (BALL)    RelPolarVdWSurface (BALL)    Tube (BALL::VIEW)   
ComboBoxDelegate (BALL::VIEW)    HTMLPage (BALL::VIEW)    FPTBondOrderStrategy::Option (BALL)    RelPositivePartialCharge (BALL)    TwoColoredLine (BALL::VIEW)   
CompositeManager (BALL::VIEW)    HTMLView (BALL::VIEW)    GAFFTypeProcessor::Option (BALL)    RelPositivePolarVdWSurface (BALL)    TwoColoredTube (BALL::VIEW)   
CompositeMessage (BALL::VIEW)    HTMLViewDock (BALL::VIEW)    GeneralizedBornModel::Option (BALL)    RelPositiveVdWSurface (BALL)   
  u  
CompositeProperties (BALL::VIEW)    HTMLViewErrorWidget (BALL::VIEW)    GeometricFit::Option (BALL)    Rescorer (BALL)   
ConfigDialog (BALL::VIEW)    hash< BALL::Quadruple< T1, T2, T3, T4 > > (boost)    GridBasedScoring::Option (BALL)    Rescoring (BALL)    UnconnectedGraphException (BALL::GRAPH)   
ConnectionObject (BALL::VIEW)    hash< BALL::SortedPosition2 > (boost)    HBondProcessor::Option (BALL)    Rescoring1D (BALL)    UndoEliminateOperation (BALL::GRAPH)   
ContourSurfaceDialog (BALL::VIEW)    hash< BALL::SortedPosition3 > (boost)    HybridisationProcessor::Option (BALL)    Rescoring3D (BALL)    RecordCRYST1::UnitCell (BALL::PDB)   
ControlSelectionMessage (BALL::VIEW)    hash< BALL::String > (boost)    HydrogenBond::Option (BALL)    Rescoring4D (BALL)    Structure::UnitCellInfo (BALL::PDB)   
CreateRepresentationMessage (BALL::VIEW)    hash< BALL::Triple< T1, T2, T3 > > (boost)    HydrogenBondSlick::Option (BALL)    Rescoring::RescoreQSARData (BALL)    UPThread (BALL::SimpleDownloaderHelper)   
CudaVolumeRenderer (BALL::VIEW)    hash< RTpieCpp::InstanceHandle > (boost)    IMGDock::Option (BALL)    Residue (BALL)    Substring::UnboundSubstring (BALL)   
CustomColorProcessor (BALL::VIEW)    hash< RTpieCpp::MeshHandle > (boost)    KGreedyBondOrderStrategy::Option (BALL)    ResidueChecker (BALL)    UCK (BALL)   
DockResultDialog::Compare_ (BALL::VIEW)   
  i  
Lipophilic::Option (BALL)    ResidueIDPredicate (BALL)    UhligCavFreeEnergyProcessor (BALL)   
hash< RTpieCpp::InstanceHandle >::conv (boost)    MMFF94::Option (BALL)    ResidueIteratorTraits (BALL)    UnaryFunctor (BALL)   
hash< RTpieCpp::MeshHandle >::conv (boost)    Bit::IllegalOperation (BALL)    MMFF94OutOfPlaneBend::OutOfPlaneBend (BALL)    ResiduePredicate (BALL)    UnaryPredicate (BALL)   
  d  
CIFFile::Item (BALL)    MolecularDynamics::Option (BALL)    ResidueRotamerSet (BALL)    UnaryProcessor (BALL)   
Client::InvalidClient (BALL)    NonpolarSolvation::Option (BALL)    ResidueRotamerSet::RotamerProbabilityGreaterThan_ (BALL)    UIntEditorWidget (BALL::VIEW)   
AmberFF::Default (BALL)    Enumerator::IteratorTraits_ (BALL)    NumericalSAS::Option (BALL)    ResidueTorsions (BALL)    UIOperationMode (BALL::VIEW)   
AromaticityProcessor::Default (BALL)    EnumeratorIndex::IncompatibleIndex (BALL)    Object (BALL)    ResourceEntry (BALL)    UndoManagerDialog (BALL::VIEW)   
AromaticRingStacking::Default (BALL)    IllegalPosition (BALL::Exception)    ObjectCreator (BALL)    ResourceFile (BALL)    UpdateRepresentationThread (BALL::VIEW)   
AssignBondOrderProcessor::Default (BALL)    IllegalSelfOperation (BALL::Exception)    Options (BALL)    Result (BALL)   
  v  
AStarBondOrderStrategy::Default (BALL)    IllegalTreeOperation (BALL::Exception)    Pair6_12InteractionEnergyProcessor::Option (BALL)    Result::ResultData (BALL)   
BinaryFingerprintMethods::Default (BALL)    IncompatibleIterators (BALL::Exception)    Pair6_12RDFIntegrator::Option (BALL)    RGroupAssembler (BALL)    CharmmEEF1::Values (BALL)   
BindingPocketProcessor::Default (BALL)    IndexOverflow (BALL::Exception)    PairExpInteractionEnergyProcessor::Option (BALL)    RingAnalyser (BALL)    CosineTorsion::Values (BALL)   
BranchAndBoundBondOrderStrategy::Default (BALL)    IndexUnderflow (BALL::Exception)    PairExpRDFIntegrator::Option (BALL)    RingAnalyser::Ring (BALL)    LennardJones::Values (BALL)   
BuildBondsProcessor::Default (BALL)    InvalidArgument (BALL::Exception)    PCMCavFreeEnergyProcessor::Option (BALL)    RingFinder (BALL)    MMFF94VDWParameters::VDWEntry (BALL)   
BuriedPolar::Default (BALL)    InvalidFormat (BALL::Exception)    PDBFile::Option (BALL)    RingPerceptionProcessor (BALL)    Potential1210::Values (BALL)   
CharmmEEF1::Data (BALL)    InvalidIterator (BALL::Exception)    NameConverter::Option (BALL::Peptides)    RMSDMinimizer (BALL)    Validation (BALL::QSAR)   
CharmmFF::Default (BALL)    InvalidOption (BALL::Exception)    PeriodicBoundary::Option (BALL)    RombergIntegrator (BALL)    ValidationConfiguration (BALL::QSAR)   
CHPI::Default (BALL)    InvalidRange (BALL::Exception)    PierottiCavFreeEnergyProcessor::Option (BALL)    Rotamer (BALL)    QuadraticAngleBend::Values (BALL)   
CHPISlick::Default (BALL)    InvalidSize (BALL::Exception)    PolarSolvation::Option (BALL)    RotamerLibrary (BALL)    QuadraticBondStretch::Values (BALL)   
CIFFile::Datablock (BALL)    IllegalStateException (BALL::GRAPH)    PoseClustering::Option (BALL)    RotateBond (BALL)    QuadraticImproperTorsion::Values (BALL)   
CIFFile::Datacontent (BALL)    HashMap::IllegalKey (BALL)    OPLSModel (BALL::QSAR)    RotateBonds (BALL)    VanDerWaals (BALL)   
ConjugateGradientMinimizer::Default (BALL)    HashSet::IllegalKey (BALL)    ReissCavFreeEnergyProcessor::Option (BALL)    RotationalEntropy (BALL)    VanDerWaalsSlick (BALL)   
CosineTorsion::Data (BALL)    HashSet::IteratorTraits (BALL)    ScoringFunction::Option (BALL)    RSComputer (BALL)    VdWSurface (BALL)   
CrystalGenerator::Default (BALL)    ILPBondOrderStrategy (BALL)    SDGenerator::Option (BALL)    RSEdge (BALL)    VdWVolume (BALL)   
CrystalInfo::Default (BALL)    IMGDock (BALL)    ShiftedLVMMMinimizer::Option (BALL)    RSFace (BALL)    VersionInfo (BALL)   
DCDFile (BALL)    INIFile (BALL)    SideChainPlacementProcessor::Option (BALL)    RSVertex (BALL)    VertexAdjacency (BALL)   
Density (BALL)    INIFile::IteratorTraits_ (BALL)    SLICKEnergy::Option (BALL)    RuleEvaluator (BALL)    VertexAdjacencyEquality (BALL)   
Descriptor (BALL)    InRingPredicate (BALL)    SLICKScore::Option (BALL)    RuleProcessor (BALL)    VectorGridController (BALL::VIEW)   
DifferentiableScoringFunction (BALL)    RecordDBREF::InitialDatabaseSegment (BALL::PDB)    SnapShotManager::Option (BALL)    ScoringFunction::Result (BALL)    Vertex (BALL::VIEW)   
DiffGridBasedScoring (BALL)    RecordDBREF::InitialSequence (BALL::PDB)    StrangLBFGSMinimizer::Option (BALL)    ScoringOptimizer::Result (BALL)    Vertex2 (BALL::VIEW)   
Directory (BALL)    InconsistentUsage (BALL::QSAR::Exception)    UhligCavFreeEnergyProcessor::Option (BALL)    SmartsMatcher::RecStruct_ (BALL)    VIEWPlugin (BALL::VIEW)   
DisulfidBondProcessor (BALL)    InvalidActivityID (BALL::QSAR::Exception)    VanDerWaalsSlick::Option (BALL)    SmartsMatcher::RecStructCore_ (BALL)    VRMLRenderer (BALL::VIEW)   
Division (BALL)    InputConfiguration (BALL::QSAR)    AtomOverview::OverviewProcessor (BALL::VIEW)    SmartsMatcher::RecStructPool_ (BALL)    Visitor (BALL)   
DNAMutator (BALL)    InputPartitioningConfiguration (BALL::QSAR)    OccupancyColorProcessor (BALL::VIEW)    RaytraceableContourSurfaceDialog (BALL::VIEW)   
  w  
DockingAlgorithm (BALL)    ResourceEntry::IteratorTraits_ (BALL)    OpenSavePreferences (BALL::VIEW)    RaytraceableGrid (BALL::VIEW)   
DockProblem (BALL)    RMSDMinimizer::IncompatibleCoordinateSets (BALL)    SDWidget::Option (BALL::VIEW)    RaytraceableGridController (BALL::VIEW)    WrongDataType (BALL::QSAR::Exception)   
DockResult (BALL)    Substring::InvalidSubstring (BALL)   
  p  
RaytracingRenderer (BALL::VIEW)    WrongFileFormat (BALL::QSAR::Exception)   
DockResultFile (BALL)    TRegularData2D::IndexType (BALL)    RegisterHelpSystemMessage (BALL::VIEW)    GLRenderer::WrongModes (BALL::VIEW)   
DoubleBondsPredicate (BALL)    TRegularData3D::IndexType (BALL)    EmpiricalHSShiftProcessor::PropertiesForShift_ (BALL)    RegularData3DController (BALL::VIEW)    WriteLockerType   
DoubleGene (BALL)    IconLoader (BALL::VIEW)    ParseError (BALL::Exception)    Renderer (BALL::VIEW)   
  x  
DoubleParameter (BALL)    InputDeviceDriver (BALL::VIEW)    Postcondition (BALL::Exception)    RenderSetup (BALL::VIEW)   
DoubleTraits (BALL)    InputDevPluginHandler (BALL::VIEW)    Precondition (BALL::Exception)    RenderTarget (BALL::VIEW)    XML3DRenderer (BALL::VIEW)   
DSN6File (BALL)    InputPlugin (BALL::VIEW)    GeometricFit::Peak_ (BALL)    RenderToBufferFinishedEvent (BALL::VIEW)    XML3DRenderer::XML3DRendererClippingPlane (BALL::VIEW)   
ElectrostaticPotentialCalculator::Default (BALL)    IntEditorWidget (BALL::VIEW)    PostOrderFolding (BALL::GRAPH)    Representation (BALL::VIEW)    XDRPersistenceManager (BALL)   
EmpiricalHSShiftProcessor::Default (BALL)    InteractionMode (BALL::VIEW)    HBondProcessor::PredictionMethod (BALL)    RepresentationManager (BALL::VIEW)    XYZFile (BALL)   
EnergyMinimizer::Default (BALL)    InteractionModeManager (BALL::VIEW)    MOLFile::Property (BALL)    RepresentationMessage (BALL::VIEW)   
  z  
EvolutionaryDocking::Default (BALL)    InterpolateColorProcessor (BALL::VIEW)    Pair6_12InteractionEnergyProcessor (BALL)    ResidueNameColorProcessor (BALL::VIEW)   
DivisionByZero (BALL::Exception)   
  j  
Pair6_12RDFIntegrator (BALL)    ResidueNumberColorProcessor (BALL::VIEW)    ZagrebIndex (BALL)   
FDPB::Default (BALL)    PairExpInteractionEnergyProcessor (BALL)    ResidueTypeColorProcessor (BALL::VIEW)   
FDPB::DielectricSmoothing (BALL)    JCAMPFile (BALL)    PairExpRDFIntegrator (BALL)    Resolution (BALL::VIEW)   
FPTBondOrderStrategy::Default (BALL)    JCAMPFile::JCAMPValue (BALL)    Parameters (BALL)    RotateMode (BALL::VIEW)   
FPTBondOrderStrategy::DPBackTracking_ (BALL)    JohnsonBoveyShiftProcessor (BALL)    ParameterSection (BALL)    RTfactRenderer (BALL::VIEW)   
FPTBondOrderStrategy::DPBackTrackingCombiner_ (BALL)   
  k  
ParamFile (BALL)    RTfactRenderer::RTfactData (BALL::VIEW)   
KCFFile (BALL)   
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