Class ReadBase

    • Constructor Detail

      • ReadBase

        public ReadBase​(int position,
                        byte base,
                        byte qualityScore)
    • Method Detail

      • getOperator

        public byte getOperator()
        Description copied from interface: ReadFeature
        Read features are distinguished by operator, similar to cigar operator.
        Specified by:
        getOperator in interface ReadFeature
        Returns:
        type of the read feature
      • getPosition

        public int getPosition()
        Specified by:
        getPosition in interface ReadFeature
        Returns:
        zero-based position in the read
      • getQualityScore

        public byte getQualityScore()
      • getBase

        public byte getBase()
      • setBase

        public void setBase​(byte base)
      • hashCode

        public int hashCode()
        Overrides:
        hashCode in class Object