18 #include "SamRecord.h"
19 #include "SamValidation.h"
20 #include "ValidationTest.h"
38 assert(testRecord.setReadName(qname) ==
false);
39 assert(strcmp(testRecord.getReadName(),
"UNKNOWN") == 0);
46 memset(qname,
'.', 255);
48 assert(testRecord.setReadName(qname) ==
true);
49 assert(strcmp(testRecord.getReadName(), qname) == 0);
65 int bufferBlockSize = 32;
70 bufferRecordPtr->myBlockSize = bufferBlockSize;
71 bufferRecordPtr->myReferenceID = -1;
72 bufferRecordPtr->myPosition = 1010;
74 bufferRecordPtr->myReadNameLength = 0;
75 bufferRecordPtr->myMapQuality = 0;
76 bufferRecordPtr->myBin = 4681;
77 bufferRecordPtr->myCigarLength = 0;
78 bufferRecordPtr->myFlag = 73;
79 bufferRecordPtr->myReadLength = 0;
80 bufferRecordPtr->myMateReferenceID = -1;
81 bufferRecordPtr->myMatePosition = 1010;
82 bufferRecordPtr->myInsertSize = 0;
84 assert(testRecord.setBuffer((
const char*)bufferRecordPtr,
85 bufferBlockSize +
sizeof(
int),
100 bufferRecordPtr->myBlockSize = bufferBlockSize;
102 bufferRecordPtr->myReadNameLength = 8;
103 bufferRecordPtr->myData[0] =
'H';
104 bufferRecordPtr->myData[1] =
'I';
105 bufferRecordPtr->myData[2] = 0;
107 assert(testRecord.setBuffer((
const char*)bufferRecordPtr,
108 bufferBlockSize +
sizeof(
int),
123 bufferBlockSize = 34;
124 bufferRecordPtr->myBlockSize = bufferBlockSize;
126 bufferRecordPtr->myReadNameLength = 2;
127 bufferRecordPtr->myData[0] =
'H';
128 bufferRecordPtr->myData[1] =
'I';
129 bufferRecordPtr->myData[2] = 0;
131 assert(testRecord.setBuffer((
const char*)bufferRecordPtr,
132 bufferBlockSize +
sizeof(
int),
159 int bufferBlockSize = 35;
164 bufferRecordPtr->myBlockSize = bufferBlockSize;
165 bufferRecordPtr->myPosition = 1010;
166 bufferRecordPtr->myReferenceID = -1;
168 bufferRecordPtr->myReadNameLength = 3;
169 bufferRecordPtr->myMapQuality = 0;
170 bufferRecordPtr->myBin = 4681;
171 bufferRecordPtr->myCigarLength = 0;
172 bufferRecordPtr->myFlag = 73;
173 bufferRecordPtr->myReadLength = 0;
174 bufferRecordPtr->myMateReferenceID = -1;
175 bufferRecordPtr->myMatePosition = 1010;
176 bufferRecordPtr->myInsertSize = 0;
177 bufferRecordPtr->myData[0] =
'H';
178 bufferRecordPtr->myData[1] =
'I';
179 bufferRecordPtr->myData[2] = 0;
183 bufferRecordPtr->myReferenceID = 100;
185 assert(testRecord.setBuffer((
const char*)bufferRecordPtr,
186 bufferBlockSize +
sizeof(
int),
200 bufferRecordPtr->myReferenceID = -100;
202 assert(testRecord.setBuffer((
const char*)bufferRecordPtr,
203 bufferBlockSize +
sizeof(
int),