Package picard.illumina.parser
Class CbclData
- java.lang.Object
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- picard.illumina.parser.BclData
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- picard.illumina.parser.CbclData
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public class CbclData extends BclData
This class provides that data structure for cbcls. This includes BCL data as well as PF (pass-filter) data and positional information.
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Constructor Summary
Constructors Constructor Description CbclData(int[] outputLengths, int tile)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description AbstractIlluminaPositionFileReader.PositionInfo
getPositionInfo()
int
getTile()
int
getXCoordinate()
int
getYCoordinate()
boolean
isPf()
void
setPositionInfo(AbstractIlluminaPositionFileReader.PositionInfo positionInfo)
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Methods inherited from class picard.illumina.parser.BclData
getBases, getQualities
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Method Detail
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isPf
public boolean isPf()
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getTile
public int getTile()
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getPositionInfo
public AbstractIlluminaPositionFileReader.PositionInfo getPositionInfo()
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setPositionInfo
public void setPositionInfo(AbstractIlluminaPositionFileReader.PositionInfo positionInfo)
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getXCoordinate
public int getXCoordinate()
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getYCoordinate
public int getYCoordinate()
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