Class AbstractIlluminaPositionFileReader.PositionInfo

    • Field Summary

      Fields 
      Modifier and Type Field Description
      int lane
      The lane, which is determined from the file name
      int tile
      The tile, which is determined from the file name
      float xPos
      The x-position as it occurs in the file being read
      int xQseqCoord
      The QSeq style x-coordinat, an integer = Math.round(xPos*10 + 1000)
      float yPos
      The y-position as it occurs in the file being read
      int yQseqCoord
      The QSeq style y-coordinates, an integer = Math.round(yPos*10 + 1000)
    • Constructor Summary

      Constructors 
      Constructor Description
      PositionInfo​(float x, float y, int lane, int tile)  
    • Field Detail

      • xPos

        public final float xPos
        The x-position as it occurs in the file being read
      • yPos

        public final float yPos
        The y-position as it occurs in the file being read
      • lane

        public final int lane
        The lane, which is determined from the file name
      • tile

        public final int tile
        The tile, which is determined from the file name
      • xQseqCoord

        public final int xQseqCoord
        The QSeq style x-coordinat, an integer = Math.round(xPos*10 + 1000)
      • yQseqCoord

        public final int yQseqCoord
        The QSeq style y-coordinates, an integer = Math.round(yPos*10 + 1000)
    • Constructor Detail

      • PositionInfo

        public PositionInfo​(float x,
                            float y,
                            int lane,
                            int tile)
    • Method Detail