18 #ifndef __WEIPA_SPECKLEYDOMAIN_H__
19 #define __WEIPA_SPECKLEYDOMAIN_H__
21 #include <weipa/DomainChunk.h>
22 #include <weipa/SpeckleyElements.h>
23 #include <boost/enable_shared_from_this.hpp>
44 virtual bool writeToSilo(DBfile* dbfile,
const std::string& pathInSilo,
Base class for all escript domains.
Definition: AbstractDomain.h:51
Abstract base class for weipa's interface to an Escript domain or one chunk thereof if domain decompo...
Definition: DomainChunk.h:47
Represents a full Speckley domain including nodes and elements.
Definition: weipa/src/SpeckleyDomain.h:37
virtual NodeData_ptr getMeshByName(const std::string &name) const
Returns the node mesh with given name.
Definition: weipa/src/SpeckleyDomain.cpp:200
virtual ElementData_ptr getElementsByName(const std::string &name) const
Returns element data with given name.
Definition: weipa/src/SpeckleyDomain.cpp:189
virtual bool initFromFile(const std::string &filename)
Reads the domain from a dump file.
Definition: weipa/src/SpeckleyDomain.cpp:69
virtual bool writeToSilo(DBfile *dbfile, const std::string &pathInSilo, const StringVec &labels, const StringVec &units, bool writeMeshData)
Writes the domain to a Silo file.
Definition: weipa/src/SpeckleyDomain.cpp:222
virtual StringVec getMeshNames() const
Returns the names of all meshes within this domain.
Definition: weipa/src/SpeckleyDomain.cpp:126
virtual void setSiloPath(const std::string &path)
Sets the silo path to be used when saving to a Silo file.
Definition: weipa/src/SpeckleyDomain.h:59
virtual bool initFromEscript(const escript::AbstractDomain *domain)
Initialises the domain using an escript domain instance.
Definition: weipa/src/SpeckleyDomain.cpp:50
virtual ~SpeckleyDomain()
Definition: weipa/src/SpeckleyDomain.h:41
SpeckleyElements_ptr cells
Definition: weipa/src/SpeckleyDomain.h:64
virtual DataVar_ptr getDataVarByName(const std::string &name) const
Creates and returns a variable with domain data.
Definition: weipa/src/SpeckleyDomain.cpp:157
virtual Centering getCenteringForFunctionSpace(int fsCode) const
Returns whether data on given function space is node or cell centered.
Definition: weipa/src/SpeckleyDomain.cpp:75
SpeckleyDomain()
Definition: weipa/src/SpeckleyDomain.cpp:36
SpeckleyElements_ptr faces
Definition: weipa/src/SpeckleyDomain.h:65
virtual ElementData_ptr getElementsForFunctionSpace(int fsCode) const
Returns the element data for given function space code.
Definition: weipa/src/SpeckleyDomain.cpp:97
SpeckleyNodes_ptr nodes
Definition: weipa/src/SpeckleyDomain.h:63
virtual StringVec getVarNames() const
Returns the names of all 'special' domain variables.
Definition: weipa/src/SpeckleyDomain.cpp:142
bool initialized
Definition: weipa/src/SpeckleyDomain.h:62
virtual NodeData_ptr getNodes() const
Returns a pointer to the full nodes.
Definition: weipa/src/SpeckleyDomain.h:57
virtual void reorderGhostZones(int ownIndex)
Reorders elements so that 'ghost' elements (i.e. those that do not belong to ownIndex) appear last.
Definition: weipa/src/SpeckleyDomain.cpp:212
virtual NodeData_ptr getMeshForFunctionSpace(int fsCode) const
Returns the node mesh for given function space code.
Definition: weipa/src/SpeckleyDomain.cpp:81
std::string siloPath
Definition: weipa/src/SpeckleyDomain.h:66
virtual void removeGhostZones(int ownIndex)
Removes 'ghost' elements and nodes.
Definition: weipa/src/SpeckleyDomain.cpp:217
virtual std::string getSiloPath() const
Returns the absolute path within Silo file if writeToSilo() or setSiloPath() was called before,...
Definition: weipa/src/SpeckleyDomain.h:58
Definition: DataVar.cpp:51
boost::shared_ptr< SpeckleyNodes > SpeckleyNodes_ptr
Definition: SpeckleyNodes.h:31
std::vector< std::string > StringVec
Definition: weipa.h:61
boost::shared_ptr< ElementData > ElementData_ptr
Definition: weipa.h:67
Centering
Definition: DomainChunk.h:31
boost::shared_ptr< SpeckleyElements > SpeckleyElements_ptr
Definition: SpeckleyElements.h:33
boost::shared_ptr< NodeData > NodeData_ptr
Definition: weipa.h:69
boost::shared_ptr< DataVar > DataVar_ptr
Definition: weipa.h:65